Clostridium gelidum: psyc5s11_00120
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Entry
psyc5s11_00120 CDS
T08447
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cgel
Clostridium gelidum
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgel03400
]
psyc5s11_00120 (addB)
Enzymes [BR:
cgel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
psyc5s11_00120 (addB)
DNA repair and recombination proteins [BR:
cgel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
psyc5s11_00120 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
DUF6730
Motif
Other DBs
NCBI-ProteinID:
BCZ43945
LinkDB
All DBs
Position
18703..22158
Genome browser
AA seq
1151 aa
AA seq
DB search
MSIRFIYGRAGVGKSKFCIDQIKNNIVEETDNKLILLVPEQYTFNTENKVLKFIGERALL
RTEVLSFKKMAHEVSEECGGRVKDIIKESGRNMLIHRVLNENMDSLDYFKKISREQGFNE
IISEIISEFKKYNVDIETLRKIDEKVDDIELIQKLNELTIIYEAFNSKMHESYIDGDDEL
TLLSKKLLENDIYTGAEVWIDEFTSFTPQQLEIVRLLAKRCKRVNITLCMECKSLEGEDI
TDVFNTINNTENNILKIMKENNVAYDEPIDLNNNIPYRFKDNLELKHIERYFFTYPFNEY
DKSCNSVVLYKANNIYDEVDRVAKSIVELVREKGYRYKDISVVCRNIDDYEKVTSVIFKD
YDIPYFLDKKTQLLSNPLIILISSAFEILFKNWSYESMFKYLKSGLVGIENSYIDILENF
ILEHGIKSYKWTVEEIISEKWFNNNEELTKEKILISEIMDEIRKPLMTFHNKINGKYKVR
DICAAIYEFIIDVKAFERINNWIENFEKIGLEDKVKEYSQVQSIVVDILDQAVDVIGEEI
LESFEFFKILNSGFTNETIGVIPVALDQVNIGDIARIKGRDVKVLYIVGINDGVLPSSKK
DEGILSDKDRGILNEIGVKLASTTRNKVFEEQFLLYTALSISSEYLMLSYPMADFEGKSL
RPSIVIPRIKKIFPKLVEESAIYDLKSRKDKISKVIAPIPTFNELIVAVRRDFDKEDIEA
YWPEVYNWFKENEDFKDKVKNIFKGLTYSNVGDKVAKKKLRKLYQNEMGKLVFSVSRLEK
YAECPFSYFVQYGLKAKNRKVYEFTPPDLGSFVHEMLDSFTNKIKDEGILWSELDNEKCN
AIVSNIIDKKLNGESNYILNSTKKFKYLAQRFKRVISKSVSVIANQIGKGEFEVFKTEFN
FGSFSSGEAITLDLESKEKIYLQGRIDRIDTLDLDGETYIRIIDYKTGAKKFDLNELYYG
LQMQLLVYLDALIKNSKYILDKQVRPGAVLYFKIDDPIIKGKKEMTTEEVQQEVLDALKM
KGLILKDARVARAMDKDIEGYSLVIPAAFKTDGDFKANSDVVTEDEFTLLRKYVNKKMIE
LCEDMLSGDIKIEPTKHSNRTHCEYCDFSAICQFDSSIKDNKYKIIMKKPQNDIWNNIEK
EISNSNEASDS
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgagtataagatttatttacggaagagcaggagtaggaaaaagtaagttttgtattgat
caaataaaaaataatatagttgaagagactgataataaattaattttattagttccagaa
caatatacatttaatactgaaaacaaggttttaaagttcattggagagcgtgctcttctg
agaacagaagtattaagttttaagaaaatggcacatgaagtttctgaagaatgtggtgga
cgtgttaaagatataataaaagagtctggaagaaacatgctaattcatagggtactaaat
gaaaatatggattctttagattattttaaaaaaatatctagggagcaaggatttaatgaa
attatatctgaaataataagtgaatttaaaaaatacaatgttgatatagagaccttgaga
aaaatagatgaaaaagtagatgatattgaattgatacaaaagcttaatgaattaacaata
atttatgaagcatttaattcaaagatgcatgaaagttatattgatggagatgatgaatta
acattattaagcaagaaattattagaaaatgatatatatacaggtgctgaagtctggata
gatgaattcactagttttacccctcaacaattggagattgtaagactattagcaaagagg
tgtaagagagttaatataaccctttgtatggaatgtaaatcattagagggtgaagacata
acggatgtatttaatactataaacaatacagaaaataatatattaaaaataatgaaagaa
aataatgtagcttatgatgaacctattgatttaaataataatataccatatagatttaag
gataacttagaacttaagcatatagaaaggtacttttttacttatccatttaatgaatat
gataaaagctgtaatagtgtagtactttataaagcaaataacatttatgatgaagtagat
agagttgctaaaagcattgtagagcttgtaagagaaaagggatatagatataaagatata
tctgtagtttgcagaaatatagatgattatgaaaaagtaacatcagtaatatttaaggat
tatgatattccatatttcttggataaaaaaactcaattattgagcaatccattaattata
cttataagttctgcttttgaaatattatttaaaaattggtcttatgagagtatgtttaag
tatttaaaaagtggattagttggaatagagaattcatatatagatattttagagaatttt
atattagaacacggaataaagagctataaatggacagtagaggaaataattagcgaaaag
tggtttaataataatgaagaattaacaaaagaaaaaatattaatatctgaaattatggat
gagataagaaagcctcttatgacttttcataataaaataaatggaaaatataaagttaga
gatatatgcgcagctatttatgagtttataatagatgtaaaagcttttgaaagaataaat
aattggattgaaaattttgagaaaattggattagaagataaggttaaggaatatagtcaa
gttcaaagtatagttgtagatattttagatcaagcagtagatgtaattggtgaagaaata
ctagaatcatttgaatttttcaagatattaaattctggttttacaaatgaaacaataggt
gttatacctgtagctttagatcaagttaatattggtgacatagcaaggattaaaggtaga
gatgttaaggttctttatatagtgggaattaatgacggtgtattaccatcttctaaaaag
gatgagggaatattatctgataaagataggggaatattaaatgaaataggagtaaagtta
gcatcaactactagaaacaaggtttttgaggaacagtttttattatatacagcattatca
ataagtagtgaatatttaatgttatcatatcctatggcagattttgaaggcaagtcatta
agaccatctatagttatacctaggattaagaaaatattccccaaattagttgaggaaagt
gcaatctatgatttaaaaagccgaaaggacaaaataagtaaagttattgcaccaattcct
acctttaatgaacttatagttgctgtaagaagagattttgacaaagaagatatagaagct
tactggccagaggtttacaactggtttaaggaaaatgaggattttaaggataaggttaaa
aatatatttaaaggtcttacatattctaatgtaggagataaagttgctaagaaaaagctt
agaaaactttatcaaaatgagatgggaaaattggtgtttagtgtttcaagattagaaaaa
tatgccgaatgtccattttcttattttgttcaatatggccttaaggctaaaaatagaaaa
gtatatgaatttacgccacctgatttaggttcatttgtacatgagatgttagattcattt
acaaataagattaaagatgaagggattttatggtctgaattagacaatgaaaaatgtaac
gctattgtatctaatataattgataaaaaattaaatggagaaagtaattatatattaaat
agtacaaagaagtttaaatatttagcacaacgttttaaaagagtaatttctaaatctgtt
tcagttattgcaaatcaaataggaaaaggtgaatttgaagtattcaagactgaatttaat
tttggaagctttagttcgggggaagctataactctagatttagaatctaaagaaaaaata
tatcttcaaggtagaattgatagaatagatacattagatttagatggtgaaacctatatt
agaattatagattataaaacaggtgctaagaagtttgatttaaatgaactttattatgga
ttgcaaatgcaattattagtatatttagatgcacttattaaaaattctaaatatatatta
gataagcaagtaagacctggagcagtattatattttaaaatagatgatcctataatcaaa
ggcaagaaagaaatgactacagaagaggtacaacaagaagttttagatgctttaaagatg
aaaggattaattttaaaggatgctagagtagctcgtgctatggataaggatattgaagga
tattcattggttataccagctgcatttaaaacagatggtgattttaaggctaatagtgat
gtagtaacagaagatgagtttacgttacttagaaaatatgttaataaaaagatgattgaa
ttgtgtgaggatatgttgagtggagatattaagatagaacctactaaacattcaaataga
actcattgtgagtattgtgatttttcagcaatatgtcaatttgattcaagtataaaagat
aataaatataaaattataatgaagaaacctcaaaatgatatttggaataacatagaaaaa
gaaataagtaattctaatgaagcaagtgattcttag
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