Clostridium gelidum: psyc5s11_00130
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Entry
psyc5s11_00130 CDS
T08447
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cgel
Clostridium gelidum
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgel03400
]
psyc5s11_00130 (addA)
Enzymes [BR:
cgel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
psyc5s11_00130 (addA)
DNA repair and recombination proteins [BR:
cgel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
psyc5s11_00130 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
ResIII
DEAD
AAA_11
AAA_30
T2SSE
Motif
Other DBs
NCBI-ProteinID:
BCZ43946
LinkDB
All DBs
Position
22172..25918
Genome browser
AA seq
1248 aa
AA seq
DB search
MGETKWTDEQLSAIETRNCNLLVAAAAGSGKTAVLVERIIRIITNEENPVDIDKLLVVTF
TNAAASEMRERIANAISKELEINPNSKNLQKQLTLLNRANITTMHSFCLDVIKNNFHKID
LDPSFRIGDQTEGILIKEEVIEELFEDKYDEEEIEFTNLVEAFSSYKNDDNLKDLVLDLY
NFTMSGPWPEKWLNDSAEAFKINTLEELNETKWAKILVKSIKIEVEGYIRMMEKAIEIVN
QTDGLEPYLDNFISELSELRSVYESSNNGLEEMYKVLSSVVFSRLKSIKKDKVSDEDAQN
TVKKIRDDIKKKISELINSTFSVTPQQMLVNIQGAYTYIKKLTEIVLEFSIRFNKRKKEK
NILDFNDLEHFCLQILIDYDEDKNIIPSKVAGNFKEYFDEVLVDEYQDSNNVQETIISLV
SRKESDNPNVFMVGDVKQSIYRFRQAKPELFIDKYNIYQLNQGNNRKIQLYKNFRSRKEV
IDGVNYIFKELMSNIVGELEYTDDEALNLGASYKECNDDNVTIGGAIELNIVDKNYEVAI
QESSGESFEEQEEIENVNLEGRIVAKRIKELMSPNGDKVFNVIDKETGEYRPLRYKDIVI
LLRATKNWSESLLDELGAEGIPVYADTGSGYFESIEIRTIISLLKVIDNPMQDVPMIAVL
RSSIMNFSADELSDVRLVNKENYFYENVKCISEEVYEDQETLYSKELIDKCKSLVDCIDK
WRNKSIYMAIDEFIWYLYMDTAYYGYVGAMPNGVLRQANLKILFQRAKQFEKTSFKGLFN
FINFINKLTKSSGDMGSAKILGENEDVVRIMSIHKSKGLEFPVVFLCGTGKNFNLMDLNK
NMLYHDELGLGPDFVDLEKRFSIGTLAKEAIKKKMKFETLSEEMRILYVACTRAKEKLII
TGAINNIQRSIEKWMSSASLDHNIILPSEVLKGRSYLDWLGMALCQHNDGIKLRESIGVS
NEISRDDDSKWEINLWNKIDLINTVDLEDINTDEKHESKITYVDSMDKTTMEEVNRRLSY
RYPLKASTILKSNISVSDLKRKNIEEDYEVEEIYKEKVIITPKFIQERKGLTPAERGTAV
HFVMKKIDLSRVSSVKEIEEQLQELFDGEFLLKEELKAINPYKILNFFKSNLGTKMLELN
ESGKKIYIEVPFYTEISSLEIDNTLDDKYKDEKVRLQGIIDCFFEYNEDLILLDYKTDYV
KDGDEDTLKEKYKKQLDYYSDAIFKMTGKKVKYKYLYSFSLEKEIKVD
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagactaaatggactgatgaacaattaagtgcaattgaaacaagaaattgtaat
ttattagttgcagcagctgcgggttctggcaagactgcagttttagtagaaagaattata
aggataattacaaatgaagaaaatcccgttgatatagataaattattggttgtaacattt
actaatgcagcagcatctgaaatgagagagagaatagctaatgcaatatcaaaagaatta
gaaataaatccaaattctaaaaatcttcaaaagcaactaacattgttaaatagagctaat
attactacaatgcattcattttgtttagatgtaattaagaataactttcataagattgat
ttagatccatcttttagaattggagaccaaactgaaggtatattaattaaagaagaggta
atagaggaactttttgaagataaatatgatgaggaagagatagaatttactaatttagtt
gaagcctttagtagttacaagaatgatgataatttgaaagatttagtgctagatttatat
aattttactatgtcaggtccatggcctgaaaaatggcttaatgatagtgctgaggcgttt
aagattaatacattagaagagttaaatgaaactaagtgggctaagattttagttaaaagt
atcaaaattgaggttgagggatatataaggatgatggaaaaagccattgagatagttaat
caaactgatggattagaaccttatttagataattttataagtgagttaagtgagttaaga
agtgtctatgaatctagtaataatggattagaagaaatgtataaagtattatcatccgtt
gtgtttagtagactaaaatctataaaaaaagataaagtttcagatgaagatgctcaaaat
actgtgaagaaaattagagatgatattaaaaagaaaatatctgaactaataaatagcaca
ttttcagtaacaccacagcaaatgttagttaatattcaaggtgcatatacctatataaaa
aaattaacagaaattgttttagaatttagcattagatttaataaaagaaaaaaggaaaag
aatatattagattttaatgatttggagcatttttgtttgcaaatattaattgattatgat
gaagataaaaatataatcccatctaaggttgctgggaactttaaagaatactttgatgaa
gtacttgtagatgagtatcaagattctaataatgtacaagaaactataataagtttagta
tctagaaaagaaagtgataatcctaatgtgtttatggttggagatgttaagcaaagtata
tatagatttagacaagcaaaacctgaactatttattgataaatataacatttatcaatta
aatcaaggaaataacagaaaaattcaattatataagaatttcagaagtagaaaagaagtt
attgatggagtaaattatatatttaaagaattaatgtctaatatcgttggggaattagaa
tatacagatgatgaagcattaaatttaggtgcaagctataaagagtgtaatgatgacaat
gtaactattggtggtgcaatagagcttaatatagtagataagaattatgaagtagcaatt
caagagagttcaggagaatcctttgaagaacaagaagaaattgagaatgtaaatttagaa
ggtagaattgttgcaaagagaattaaagaattaatgtcaccaaatggagataaggtattt
aatgttatagataaggaaacgggagaatacagaccactaaggtataaggacatagtaatt
ctcttaagagcaacaaaaaactggtctgaaagcttattagatgaattaggggcagaagga
attccggtatatgcagatacaggatcaggatattttgaatcaattgaaattagaactata
atatctcttttaaaagttattgataatccaatgcaagatgttcccatgatagcagtatta
agatcttcaattatgaatttttcagcagatgaattgagtgatgttagacttgtaaataaa
gaaaattatttttatgaaaatgtaaaatgtataagtgaagaagtttatgaagatcaagaa
acactatattcaaaagaattaatagataaatgtaagtctttagttgattgcattgataag
tggagaaataaatcaatttatatggcaattgatgaatttatatggtacttatacatggat
acagcttactatggatatgttggagctatgccaaatggtgtacttaggcaagctaattta
aagatactttttcaaagggcaaaacagtttgagaaaacgagttttaaaggtttatttaat
tttataaactttataaataagcttacaaaatcttctggagatatgggaagtgctaaaata
ctcggagaaaatgaagatgtagttagaattatgagtattcataaaagtaaaggactggag
tttccagtagtattcttatgtggaaccggaaagaactttaatttgatggatttaaataaa
aatatgttatatcatgatgagctaggacttggacctgattttgtagacttagaaaaaagg
tttagtattggaactttagctaaggaagcaataaaaaagaaaatgaagtttgaaacatta
tcagaagagatgagaatactttatgttgcatgtacaagagcaaaggaaaaattaattata
acaggtgcaattaataatattcaaagatctatagaaaaatggatgagttcagcatcatta
gatcacaatattattttaccttcagaagttttaaaaggaaggtcatatttagattggctc
ggtatggcactatgccaacataatgatggaattaaacttagagagtctattggtgtttca
aatgaaatatcaagggatgatgattctaaatgggaaataaacttatggaataaaattgat
ttaattaatacagtggatttagaggatataaacactgatgagaaacatgaatcgaaaatt
acttatgttgattcaatggacaaaactactatggaagaggtaaatagaagattatcatat
agatatccattaaaagcatcaactattcttaaaagtaatatttcagtttctgatttaaag
agaaaaaatattgaagaagattatgaggttgaagaaatttataaagaaaaagtaataatt
acccctaaatttattcaagaaagaaagggtttaactccagctgaaagaggtacggcagtc
cactttgtaatgaaaaagatagatttaagtagagtttcatctgtaaaagaaattgaagaa
cagttacaggagttatttgatggggaattcttacttaaagaagaattaaaagctattaat
ccatataaaatattaaatttcttcaaatctaatttaggtacaaagatgcttgaattaaat
gagagtggtaaaaaaatatatatagaagtgccattttatactgaaataagcagcttagag
atagacaatacattagatgataaatataaggatgaaaaggtcagattgcaaggtataatt
gactgtttctttgaatataatgaggatttaatacttttagattataaaactgattatgtg
aaagatggagatgaagatactcttaaagaaaaatataagaaacaattagattattatagt
gatgcaatatttaagatgacaggtaaaaaggttaaatataagtatttatattcattttct
ttggagaaagaaataaaagttgattaa
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