Clostridium gelidum: psyc5s11_01080
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Entry
psyc5s11_01080 CDS
T08447
Symbol
hbs
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
cgel
Clostridium gelidum
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgel03032
]
psyc5s11_01080 (hbs)
03036 Chromosome and associated proteins [BR:
cgel03036
]
psyc5s11_01080 (hbs)
03400 DNA repair and recombination proteins [BR:
cgel03400
]
psyc5s11_01080 (hbs)
DNA replication proteins [BR:
cgel03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
psyc5s11_01080 (hbs)
Chromosome and associated proteins [BR:
cgel03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
psyc5s11_01080 (hbs)
DNA repair and recombination proteins [BR:
cgel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
psyc5s11_01080 (hbs)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Peptidase_C80
Motif
Other DBs
NCBI-ProteinID:
BCZ44041
UniProt:
A0ABN6ITJ5
LinkDB
All DBs
Position
136238..136513
Genome browser
AA seq
91 aa
AA seq
DB search
MNKAELITSMAEKSKLTKKDAELALKALIESVEESLEKGEKVQLVGFGTFETRARAAREG
RNPRTKEVINIPATTVPVFKAGKEFKDKVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagcagaattaataactagtatggcagaaaagagtaaattaacaaaaaaggat
gcagaattagcattaaaagctttgattgaaagtgttgaggaatcattagaaaaaggtgaa
aaagttcaattagttggatttggaactttcgaaacaagagcaagagcagctagagaagga
agaaaccctagaactaaggaagttataaacattcctgcaacaacagttccagtatttaaa
gctggtaaagaattcaaagataaagtaaacaagtaa
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