Clostridium gelidum: psyc5s11_01260
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Entry
psyc5s11_01260 CDS
T08447
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cgel
Clostridium gelidum
Pathway
cgel00470
D-Amino acid metabolism
cgel00550
Peptidoglycan biosynthesis
cgel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
psyc5s11_01260 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
psyc5s11_01260 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cgel01011
]
psyc5s11_01260 (murD)
Enzymes [BR:
cgel01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
psyc5s11_01260 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cgel01011
]
Precursor biosynthesis
Amino acid ligase
psyc5s11_01260 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
Oxidored_nitro
PipB2_N
CbiA
THF_DHG_CYH_C
TIR_2
Motif
Other DBs
NCBI-ProteinID:
BCZ44059
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All DBs
Position
158312..159688
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AA seq
458 aa
AA seq
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MRKDFREFKRFILGKKVAVVGIGVSNIPLINFLLDLGATVTAFDKKTKEELKDVATDFNN
KGVKLELGAGYLDNLNGFDVVFKTPSMRIDCESLVKVKKEGAYITSEMEEFVRYTKGKVY
AITGSDGKTTTTTIISKLLEEQGYKTWVGGNIGTPLFSQIEKINENDRVVLELSSFQLMT
MKEEVDIAICTNLAPNHLDMHKDMEEYIEAKKNIFLYQDSKGLLIVNRENEITHDFKKEA
KGIVKEFSSNREILDGSYYKEGVLYVEGKEVCKKDDIVIKGMHNVENYLAAFIATKDDVS
VETMKKVAETFTGVEHRCELVREMDGVKYYNDSIASSPTRTLAGLKAFDEKVIVIAGGYD
KKIPFEPLAYEGYPYIKELILMGATKDKIKTVFDKLEEEKGIKTNIKMAKSLEDAVNIAK
ESAEAGDIITLSPACASFDMYPNFMVRGNKFKDIVNAL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagactttagagagtttaaaaggttcatattagggaaaaaggttgcagttgtt
ggaattggcgtgagtaatattcctttaatcaactttttattagacttaggtgctacagta
acagcatttgataagaagactaaagaagaacttaaagatgtggcaactgattttaataat
aaaggtgttaaattagaacttggagcaggatatttagataatctgaatggatttgatgta
gtatttaagacaccatctatgagaattgattgtgaatcattagttaaggtaaaaaaagaa
ggggcatatattacttctgaaatggaggaatttgtaagatatactaaaggaaaagtatat
gcaataacaggcagtgatggaaagacaacaactacaacaattatttctaagttgttagaa
gaacaaggatataaaacttgggttggaggaaatataggaactccattattttcacaaata
gaaaaaataaatgaaaatgatagagttgtattggagctatctagttttcaacttatgact
atgaaagaagaagttgatattgctatatgtacaaatttagcgcctaatcatttagatatg
cataaggatatggaagagtatatagaagctaagaaaaatatttttttataccaagattcg
aaaggactattgatagtaaatagagaaaatgaaattactcatgactttaaaaaagaagca
aagggaattgtaaaagaatttagctctaatagagagatattagatggatcatattataaa
gagggtgtactttatgttgaaggaaaggaagtatgcaaaaaggatgatatagtaattaag
ggtatgcataatgttgaaaattaccttgctgcatttatagctactaaagatgatgtttct
gtggaaactatgaaaaaggttgcggaaactttcacaggtgttgaacatagatgtgaactt
gtaagagaaatggatggcgttaaatattataatgattcaatagcttcaagcccaacaaga
actttagctggacttaaagcatttgatgaaaaagtcatagttattgcaggcggatatgat
aagaagataccttttgaaccattagcctatgaaggctatccttatataaaagaattaatt
cttatgggtgcaacaaaagacaagataaagactgtatttgataagttagaagaggaaaaa
ggaattaagactaacataaaaatggctaaatcattagaggatgctgttaatatagctaaa
gagtcagctgaggcaggggatattattacattatcaccagcgtgtgcatcattcgatatg
tatcctaattttatggtaagaggaaataaatttaaagatatagtaaatgcgttataa
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