Clostridium gelidum: psyc5s11_03880
Help
Entry
psyc5s11_03880 CDS
T08447
Name
(GenBank) 8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
cgel
Clostridium gelidum
Pathway
cgel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
psyc5s11_03880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgel03400
]
psyc5s11_03880
Enzymes [BR:
cgel01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
psyc5s11_03880
DNA repair and recombination proteins [BR:
cgel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
psyc5s11_03880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
DUF7698
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
BCZ44321
LinkDB
All DBs
Position
451256..452188
Genome browser
AA seq
310 aa
AA seq
DB search
MDYKTVKSCDDYVIIEEVKNFKLKHIFECGQIFRFEEIAESNYIIIAFGKVIELKEQDNN
ILIYNSTEEEVKKIWLKYFDLDRDYSKIKDELSKDTLLRQSIEFGYGIRVLNQDSFEMLL
SFIISARNNIPSIKKTVNKISIKWGKKIEYKDKTYYTFPCISDIKDATLEEIQETGASFR
SKYLIDTIKNAYSSKMEKGNSNIDEENSSMKYDLDYIKSLNDDECHNALQEFKGVGAKVA
DCIMLFSMEKTSAFPVDVWVKRAMIHFYGAEDSSLNKIRIFARSKFGEVAGFAQQYLFYY
ARENKIKIEE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggattataaaacagtaaagtcttgtgatgactatgtaataatagaagaagttaagaat
tttaagttgaaacatatatttgagtgtggacaaatctttagatttgaggaaattgcagaa
agtaattatattattattgcttttggaaaggtaatagaacttaaggaacaggacaataat
atcttaatatataattcaacagaagaagaagtgaaaaaaatctggttaaaatattttgat
ttagatagagattattcaaaaataaaagatgaattatcaaaagatactttgcttagacaa
agtattgagtttggatatggcataagagttttaaatcaagactcatttgaaatgttacta
agttttattatttctgcaagaaataatattccatcaataaaaaaaactgtaaacaaaata
tcaattaaatggggcaaaaaaattgaatataaagataagacttattatacttttccatgt
atatctgacataaaagatgctaccctagaagaaatacaagaaacaggagcttcatttaga
agtaaatacttaattgatacaattaaaaatgcatatagttctaaaatggaaaaagggaat
tcaaatatagatgaagaaaattcatctatgaaatacgatttagattatataaaaagttta
aatgatgatgaatgtcataatgcgctacaagaatttaagggtgttggagctaaggttgct
gattgcataatgttattttctatggaaaagacttcagcatttccagtagatgtatgggtt
aaacgagctatgattcatttttatggagcagaggattcatctttaaataaaatcagaatt
tttgcaagaagtaaattcggtgaagtagctggatttgcacaacaatatcttttttattat
gcacgggaaaataaaataaaaattgaagagtaa
DBGET
integrated database retrieval system