Clostridium gelidum: psyc5s11_05920
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Entry
psyc5s11_05920 CDS
T08447
Symbol
recD2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cgel
Clostridium gelidum
Pathway
cgel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
psyc5s11_05920 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgel03400
]
psyc5s11_05920 (recD2)
Enzymes [BR:
cgel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
psyc5s11_05920 (recD2)
DNA repair and recombination proteins [BR:
cgel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
psyc5s11_05920 (recD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
PIF1
NAT10_TcmA_helicase
AAA_22
PhoH
SLFN-g3_helicase
DEAD
nSTAND3
AAA
DNA_pol_lambd_f
AAA_28
HHH_2
ATPase_2
AAA_23
NTPase_1
AAA_12
NPHP3_N
cobW
HHH_3
AAA_29
SRP54
UvrD-helicase
T2SSE
HTH_72
ABC_tran
ABC_ATPase
AAA_5
MeaB
AAA_16
SMC_N
MobB
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
BCZ44525
UniProt:
A0ABM7T0X4
LinkDB
All DBs
Position
662310..664538
Genome browser
AA seq
742 aa
AA seq
DB search
MEVLNGFVENIVFKSEDTGYVVCKIRNEKELVSAVGTVPFIKEGQNVKLTGYWTVHKQFG
NQFNIQDYEELIPTSLDGIEKYLSAGIIHGIGPVTAKKIIEQFGKQTLDIMENHIERLME
IEGIGEKKFQIIYESYIEQQGLKNVILYFNKHGVTNNQCIKIYKKFGSNAKQIVSDNPYI
LCDEISGIGFKTADRIAMSIGVESISEFRIQSGIKYVMNQFCATGNTFMPKSNIIEECEK
NLLISKELIEKNIYDMAAQQKIIIEKIDDVEIGFLLQYYYCELGVTSKIITLGLQQIQTI
NSDVDFEVDVFEKEHKIQFAESQREAILGAFNNGIEIITGGPGTGKTTIIRAIIHIYENN
GMKVILGAPTGRAAKRMTESTGREAKTIHRLLEMGVSEEDESVFEKGESSPLDCDVIIID
EASMIDIMLMQNLLKAINLGTRLIIVGDVDQLPSVGPGNVLKDLIESEYIKVVRLKEIFR
QGAESLIVINAHKINQGEMPLLNQKDKDFFFINENDQDKILNTIIDLMNRRLPKFNKSWD
ILKDMQVLTPMRKGTLGVNNLNTSLQKVFNSPSKDKKEKTSRDIVFREGDKVMQTKNNYT
LKWVRANGFGESEGAGVFNGDLGFIESIDEERKALTIIFDDERKIIYDFSFLDELDLAYA
TTIHKSQGSEFKVVIIPVFMGSPFLMNRNLLYTGITRAKQLVVVVGFQKALMYMINNTNS
IERYSALKHRIRDIITKEEFEE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggaagttctaaatggttttgttgagaacattgtttttaaaagtgaagatactggttat
gtagtttgtaaaattaggaatgaaaaagagttagttagtgctgtagggacagttcctttt
ataaaggaaggtcaaaatgtcaaattaacaggatactggacagtacataagcagtttgga
aatcaatttaatattcaagattatgaagaacttattccaacttccttagatggaatagaa
aagtatttaagtgcgggaataatacatggaattggaccagttacagctaagaagataata
gaacaatttggtaaacaaaccttagatataatggaaaatcacattgaaagactaatggag
atagaaggtataggagagaaaaagtttcaaattatatatgagtcttatatagaacagcaa
ggtcttaaaaatgtgattttatatttcaataaacatggagtaactaataatcaatgtatt
aaaatttataagaaatttggatcaaatgcaaaacaaatagtatcagataatccttatata
ttatgtgatgaaatttcaggtattggatttaaaacagcagatagaattgccatgagcatt
ggagtagagagtatctcagaatttaggattcaaagtggaattaagtatgtaatgaatcag
ttttgtgctacgggaaatacatttatgcctaaaagtaatataatagaagaatgtgaaaaa
aatttattgatatctaaggaattaattgaaaaaaatatatatgatatggcagcgcagcaa
aaaataattattgaaaagatagatgatgttgaaattggatttttacttcaatattattat
tgtgaacttggggtaacgagtaaaattattactttgggattgcaacaaatacaaactata
aattcagatgttgattttgaagttgatgtttttgaaaaggagcataaaatacagtttgca
gagtctcaaagagaagcaattcttggtgcatttaataatggtatagaaataatcacaggt
ggtcctggaacgggtaaaacgacaattataagggctataatccatatttatgaaaataat
ggtatgaaagtaatacttggagctccaactggaagagcagctaaaagaatgactgaatct
acaggaagagaggcaaaaacaatacatagacttttagaaatgggtgtttcagaagaagat
gaatcagtttttgaaaagggagaatcatcaccattagattgtgatgtaataataattgat
gaagcatctatgattgatataatgctaatgcagaatctgcttaaagcaatcaatttgggc
acaagacttataattgttggggatgttgatcaattgccttctgttggaccaggaaacgta
ttaaaagaccttatagagagtgaatatataaaagtggtaagattaaaagaaatatttaga
caaggtgcagaaagcttaattgttataaatgcacataagattaatcagggtgaaatgccc
ttgttaaatcaaaaagataaggatttcttttttattaatgaaaatgatcaagataaaatt
ttaaatacaataatagatttaatgaacagaagacttcctaaatttaataaatcttgggat
atactaaaggatatgcaagtgctaactcctatgagaaaaggaacacttggagttaataat
ttgaacactagtcttcaaaaagtatttaattcaccatcaaaagataagaaagaaaaaact
tctcgagatatagtatttagagaaggcgataaagtcatgcaaacaaagaataattatact
ttaaagtgggttagagcaaatggatttggagaaagtgaaggtgctggagtatttaatggt
gatttaggttttattgaaagcatcgatgaagagaggaaagcgttaaccattatatttgat
gatgaaagaaaaattatttatgattttagctttctagatgaattagatttagcatatgca
actaccatccacaagagtcaaggaagtgaatttaaagttgttattattcctgtatttatg
ggatcaccttttttaatgaatcgtaatttactttatacaggaatcacaagggcaaaacaa
ttggtggttgtagttggatttcaaaaagcattaatgtatatgattaataatacaaatagt
atagaacgatattcagctttaaagcatagaattagagatataataactaaagaagagttt
gaagagtaa
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