Clostridium gelidum: psyc5s11_06410
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Entry
psyc5s11_06410 CDS
T08447
Symbol
abf2
Name
(GenBank) intracellular exo-alpha-L-arabinofuranosidase 2
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
cgel
Clostridium gelidum
Pathway
cgel00520
Amino sugar and nucleotide sugar metabolism
cgel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
psyc5s11_06410 (abf2)
Enzymes [BR:
cgel01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
psyc5s11_06410 (abf2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-L-AF_C
ASD1_dom
Motif
Other DBs
NCBI-ProteinID:
BCZ44574
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All DBs
Position
715892..717370
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AA seq
492 aa
AA seq
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MSKLVVNVHDKKGKINKEIYGHFSEHLGRCIYEGIYVGENSKIPNTNGMRNDVVEALKEM
KIPVLRWPGGCFADEYHWKDGIGDNKDRKKMINTHWGGVVEDNSFGTHEFMELCRQLECE
PYINGNVGSGTVQEMSEWVEYLTLEGISPMADLRTKNGHEEAWKVKYFGVGNESWGCGGN
MTPEHYANEYRRYQTFCRNYNGNNLYKIACGANVDDYNWTEGVMKIAGNFMDGLSLHYYT
IPGDFWLGKGAATGFEEKDWYLTLKKTLKMEELIYRHGAIMDQYDPEKKVGLIVDEWGTW
FDVEVGTNPGFLYQQNTMRDALVAGINLNIFNKNCDRVKMANIAQIVNVLQSVILTEGEK
MVLTPTYHVFNMYKNHQDATLIESYIDTENIGVEEENQVPNLHESASVDADGRINITLNN
LSISDDYEIEGIFVEKEIKAVKATILTSEMGDYNTFDEPEVVKPKVFKEFTITNKGIDFK
IPKCSVIHFIIE
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagttagttgtaaacgtacacgataaaaaaggaaaaattaataaagaaatttat
ggacatttttcagaacatttaggaagatgtatttatgaaggtatatatgtaggagaaaat
tctaagattcctaatacaaatggtatgagaaatgatgtagtagaagctttaaaagaaatg
aaaataccagtacttcgttggccaggtggatgttttgctgatgaatatcattggaaagat
ggaattggagataataaagatcgtaaaaagatgataaatactcactggggtggagttgta
gaagacaatagttttggtactcatgaatttatggaattatgtagacaacttgagtgcgaa
ccatatattaatggtaatgtaggaagtggaactgttcaagaaatgtctgaatgggttgaa
tacttaacattagaaggtatttctccaatggctgaccttagaactaaaaatggacatgaa
gaagcttggaaagtaaaatattttggagttggtaatgaaagctggggttgtggcggtaat
atgacaccagaacattatgcaaatgaatacagaagatatcaaactttctgtagaaattat
aacggaaacaatctttacaaaattgcttgtggagctaatgtagacgattataattggaca
gaaggtgtaatgaagatcgcaggaaactttatggatggattatctcttcattattacaca
attccaggggatttctggctaggtaaaggagcagcaactggatttgaagaaaaggattgg
tatttaactcttaagaaaactttgaaaatggaagaattaatttatagacatggtgctatt
atggatcaatatgacccagaaaagaaagttggactaatagttgatgaatggggaacatgg
tttgatgttgaagttggaactaacccaggattcttatatcaacaaaacactatgagagat
gcattagtagcaggtattaatttaaatatatttaataaaaattgtgatagagttaagatg
gctaatattgctcaaatagtaaatgtacttcagtctgttattttaacagaaggagaaaag
atggttttaactccaacttatcatgtgtttaatatgtataaaaatcaccaagatgcaact
cttattgaaagttatatagatactgaaaatattggagttgaagaagaaaatcaagttcct
aatttacatgaatcagcttctgtagatgcagacggaagaatcaatattactttaaataac
ttatctatttctgatgattatgagattgaaggaatattcgtagaaaaagaaattaaagct
gttaaagctactattttaacaagtgaaatgggtgattacaatacttttgatgaaccagaa
gtggtaaaaccaaaagtatttaaagaattcacaattacaaataaaggaatcgactttaag
attcctaaatgtagtgtaattcacttcattatagaataa
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