Clostridium gelidum: psyc5s11_10870
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Entry
psyc5s11_10870 CDS
T08447
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
cgel
Clostridium gelidum
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgel03009
]
psyc5s11_10870
Enzymes [BR:
cgel01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
psyc5s11_10870
Ribosome biogenesis [BR:
cgel03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
psyc5s11_10870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
iHKD
Motif
Other DBs
NCBI-ProteinID:
BCZ45020
UniProt:
A0ABN6IVS5
LinkDB
All DBs
Position
1245119..1245910
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AA seq
263 aa
AA seq
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MRLDKFLAQSSIGNRKKVRTYIKEGMITVNGDVITEPAIEINESSDVIKYIGKVVDYAGK
VYYMFNKPSGYITATKDTDHKTVFDFFDNVNMNGVFHVGRLDKDTEGLLLLTNDGEFEHQ
LMYPEKHVEKTYFFWALGSLDEKDRKQLEQGIYIGKGEILTKPAKIEVQKCGMYKELKYE
MPIDNLENMHSNHYSQPVVSGYLTISEGRKHQVKRMLKAVGCYVVYLKRISIGGLILDES
LEKGQYRFLTEVEIQKLMKISKE
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgagattagataaatttttagcacaatcatccattggaaataggaaaaaggtgagaact
tatattaaagaaggtatgataacggtaaatggagacgtgataacagaacctgcaatagaa
attaatgaaagttctgatgttattaagtatattggtaaggtagttgattatgctggaaaa
gtatattatatgtttaataaaccgtctggttacattactgcaacaaaggatacagatcat
aaaacagtatttgatttttttgataatgttaacatgaatggagtattccatgtaggaaga
ttagacaaggatacagaaggcttattgttacttactaatgatggcgaatttgaacatcaa
ttaatgtatccagaaaaacatgttgaaaaaacttattttttctgggcgttgggttcttta
gatgagaaagataggaagcaattagaacaaggaatttatattggaaaaggtgaaatacta
acgaaacctgctaaaatagaagtgcaaaaatgtggaatgtataaagagttaaaatatgaa
atgcctattgataatttagaaaatatgcactcgaatcattatagtcagcctgttgtatct
ggatatcttactatttcagaggggcgcaagcatcaagtgaagcgtatgttaaaggcagta
ggctgttacgtggtatatttaaagaggatttccattggaggattaatattagatgaatca
ttagaaaaaggtcaatatagatttttgacagaagtggaaattcaaaagttaatgaaaatt
agtaaagaatag
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