Clostridium gelidum: psyc5s11_11020
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Entry
psyc5s11_11020 CDS
T08447
Symbol
atoC
Name
(GenBank) acetoacetate metabolism regulatory protein AtoC
KO
K07714
two-component system, NtrC family, response regulator AtoC
Organism
cgel
Clostridium gelidum
Pathway
cgel02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
psyc5s11_11020 (atoC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cgel02022
]
psyc5s11_11020 (atoC)
Two-component system [BR:
cgel02022
]
NtrC family
AtoS-AtoC (cPHB biosynthesis)
psyc5s11_11020 (atoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
Mg_chelatase
AAA_2
MCM
AAA_16
AAA_3
bpMoxR
DUF815
AAA_22
Parvo_NS1
AAA_7
nSTAND3
FleQ
Motif
Other DBs
NCBI-ProteinID:
BCZ45035
LinkDB
All DBs
Position
1265143..1266531
Genome browser
AA seq
462 aa
AA seq
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MTENIRVLIADDELSLRLVLQTALNKVGYEVDTVKNGKEALCMAQENYYDVAIFDIRMPE
MDGLQAFYEIHKIKPNLPIILMTAFGSSETAVDAMKHGAYDYILKPFNLDEVKIIVNRAI
RMQQLTKEVVYLTQEVQEMSMTTTTPGKIVGESSKIQEVYKIIGRVANSKATVLLTGESG
TGKGMVAKAIHYASDRREKPFIQVNCGSIPEGLLESEIFGHEKGAFTSAFFQKPGKFELA
EGGTLFLDEIAEMSPNLQVKLLRVLQEKEFERVGGTKTFHTNVRIIAATNRDLIKEIAEK
RFRKDIYYRLNVVSICLPPLCERGEDTVLLADYFLKRFSGEVGRNGMFFAPEVLDIFRNY
SWPGNIRELENAVEHAIIMSNTRVILPEDLPLSIKVEDVEEDGAIVPVNGYFKPLREILL
EAEKRHISEAIERTGGNHTHAAKLLQISRRALLYKINGNNID
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaatattcgtgttttaatagctgatgatgagctgagcctgagattggtgctt
caaacagcactaaataaggtgggatatgaagtggatacagttaaaaatggaaaagaggca
ctttgcatggcgcaggaaaactactatgatgttgctatttttgatatccgcatgccagag
atggatgggttgcaagcattttatgaaattcacaaaataaagcctaatttaccaatcatt
cttatgacagcatttggaagttcggaaactgcagttgatgctatgaaacacggtgcttat
gattatatattaaaaccttttaaccttgatgaagtgaagattattgtaaatagagctatt
cgtatgcaacaattgactaaagaagttgtatatcttacgcaggaagtgcaagagatgagc
atgacaacaacgaccccaggtaaaattgttggggaaagctctaaaatccaagaagtatat
aaaattattggccgagtagctaattcaaaagctacagtattgctaacaggagaaagtggg
acgggtaaaggaatggttgctaaggctatccattatgccagtgaccggcgagaaaaaccc
ttcattcaagtgaattgtggttcaattccagaaggtttattagagagtgaaatatttggg
catgagaagggcgcatttacaagtgccttttttcaaaaaccaggtaaatttgaactggca
gaaggtgggacactttttctagatgaaattgcggagatgagtccaaatcttcaagtaaaa
cttcttagggtgttgcaagaaaaagagtttgaacgtgttggaggtacgaaaacatttcat
acaaatgtgcgtattattgcagcaacaaaccgtgatttgattaaagaaatagctgaaaag
cgttttcgaaaggatatatattatcgacttaatgttgtttcaatatgtttacctccactt
tgtgaaagaggagaggatactgttttactagctgattactttttaaagcgtttttcggga
gaagtagggcgaaatggcatgttttttgcaccagaggtattagatatttttcgtaactat
tcttggccagggaatatcagagaattagaaaatgcagtggaacacgctattattatgagt
aacactcgtgttattttaccggaagatcttccacttagtataaaagtagaagatgttgaa
gaggatggtgccattgttccggtaaatggttatttcaaacctttgcgagaaatattgtta
gaagctgaaaaacgtcacatctccgaagctatagaacgaacagggggaaaccacacacat
gctgcaaagctccttcagatttcacgaagagcccttctttataaaattaatgggaataat
atcgattaa
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