Clostridium gelidum: psyc5s11_13040
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Entry
psyc5s11_13040 CDS
T08447
Name
(GenBank) hypothetical protein
KO
K02652
type IV pilus assembly protein PilB
Organism
cgel
Clostridium gelidum
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cgel02044
]
psyc5s11_13040
02035 Bacterial motility proteins [BR:
cgel02035
]
psyc5s11_13040
Secretion system [BR:
cgel02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
psyc5s11_13040
Bacterial motility proteins [BR:
cgel02035
]
Pilus system
Pilus assembly proteins
psyc5s11_13040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_22
nSTAND3
AAA_14
AAA_16
ATPase_2
AAA_29
AAA_7
ABC_tran
AAA_30
Rad17
DUF87
FtsK_SpoIIIE
cobW
HerA_C
AAA_11
NTPase_1
AAA_23
AAA_19
AAA_18
SLFN-g3_helicase
NPHP3_N
AAA_5
UDPG_MGDP_dh_C
DUF815
Motif
Other DBs
NCBI-ProteinID:
BCZ45237
LinkDB
All DBs
Position
1510178..1511863
Genome browser
AA seq
561 aa
AA seq
DB search
MATEKRRLGNILVNAGKITGYQLQEALKSQKALNKKLGEILVDSKIITEDEIIESIEQQT
GIKKIDLNTINFDKKAISIIPKNLCDKYTLIPFGFEHNKIKVTLSDPLNIYAIDDVAIST
GFEIESYISKKDDIKKFVGIYYSSQQVSIAAKQLSKESSESKNSKINVEDMDNVKNAPVV
KMVDYLFKNSIEMKASDIHIEPFENEIKIRYRIDGKLQTVNIINIESLGPLVTRIKILAG
LNIAEKRIPQDGRIMVTVDGKNVDLRISILPVVNGEKIVIRILNTSGGNIGREKWGMSKE
NLQMVDRIISNPHGIVLVTGPTGSGKSTTLYTLLSELNNDKVNIITVEDPVEYTLNGVNQ
VSVNNKAGLTFASGLRSILRQDPDIIMIGEIRDNETAEIATKAAITGHLVLSTLHTNDAP
SSIIRLVDMGIKPYLVATSVVGIIAQRLVRKICNNCKEPYDATEYEKEILGADKDKQLNL
YKGNGCGYCNHTGYVGRIGIYEVMEITRKHREAINLGESSDVLRDISVKNGMTTLGMECK
KVVIDGITTMSELATITMTKE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgaaaaaagaagattaggcaacattctagtaaatgcaggaaaaattactgga
tatcaattacaagaagcattaaagtctcaaaaggcacttaataaaaaacttggagaaata
ctagtcgatagtaaaataataactgaagatgaaataatagagtctatagagcaacaaaca
ggaattaaaaaaatagatttaaatacaataaattttgataaaaaggcaataagtattatt
cctaaaaatttatgcgataaatatacattaataccttttggctttgaacataataaaatt
aaagttacactttcagatcctttaaatatttatgcaatagatgatgttgcaatatctaca
ggatttgaaatagaatcatatatttctaaaaaagatgatattaaaaaatttgtgggtata
tattatagtagtcagcaagttagcattgcagcgaaacagctttccaaggaaagttctgaa
tctaaaaattcgaaaataaatgtggaagatatggataatgttaagaatgcaccagttgtt
aaaatggtggattacttatttaaaaactcaatagaaatgaaggcatcagatattcatata
gaaccatttgaaaatgaaataaaaataagatatagaatagatggtaaattacaaacagtt
aatattattaatatagaaagtctaggaccattagtaactagaataaagatactcgcagga
ttaaacattgcagaaaaaagaatacctcaagatgggagaataatggttacagtagatgga
aaaaatgtggatcttagaatttcaatacttccagtagttaatggtgagaaaatagttata
agaattctgaatacttctggtggcaatataggtagagaaaaatgggggatgagtaaagaa
aatcttcaaatggtagatagaatcatctcaaatccccatggaatagttttagttacagga
cctacaggaagtggaaaatctacaactttatatacacttttaagtgaactaaataatgat
aaagtaaatataattacagttgaagatccggtggaatatacattaaatggagtaaatcaa
gttagtgtaaataataaggctggattaacctttgcaagtggtcttagaagtatattacga
caagatcctgatataatcatgattggtgaaattagagataatgaaacagctgaaattgca
acaaaagcagctataacaggtcatttagtattaagtactcttcatactaatgatgcgcca
tcttccataataagacttgtagatatgggaataaaaccatatttagttgctacttcagta
gttggaataatagcacaaagactagttagaaaaatatgcaataattgtaaagaaccttat
gacgctactgaatatgaaaaagaaatacttggagcagataaggacaagcaattaaactta
tataagggtaatggatgtggatattgtaaccatacaggatacgtgggaagaattggtata
tatgaagttatggaaataacaagaaaacacagagaagctataaatttaggtgaaagttca
gatgtacttagagatatatcagtgaaaaatgggatgactactttaggtatggaatgtaaa
aaagttgtaattgatggaataacaacgatgtcagaacttgcaacaataactatgacgaag
gaataa
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