Clostridium gelidum: psyc5s11_14010
Help
Entry
psyc5s11_14010 CDS
T08447
Symbol
xynB2_2
Name
(GenBank) beta-xylosidase
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
cgel
Clostridium gelidum
Pathway
cgel00520
Amino sugar and nucleotide sugar metabolism
cgel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
psyc5s11_14010 (xynB2_2)
Enzymes [BR:
cgel01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
psyc5s11_14010 (xynB2_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_39
Glyco_hydro_cc
Glyco_hydro_44
NDNF
Motif
Other DBs
NCBI-ProteinID:
BCZ45334
LinkDB
All DBs
Position
1628107..1629600
Genome browser
AA seq
497 aa
AA seq
DB search
MIKHYSITNEAKFSFSNNALFCIGTGRMGLALHKAYQDQLKYVQDYIHFSHIRGHGLFSD
DMAIYQEYKDEIGNTIAEYNFTYLDMVMDSYLELRIRPFLELGFMPEKLASGDQTVFYWK
GNVTPPKTYEGWTSLVQATLRHLMERYGKDEVVNWPIEVWNEPNLSAFWKDADKQEYFKL
YELTAKAIKDVDKRFKVGGPAICGVDDVNWVKDFINFCHESFAPIDFITRHAYGTEEPER
IGHYGYQELREPEDLLRELQITRDIVDSYEEYRGMDIHITEFNTSYIPNCPLHDQNVNAA
YIARLLSTLGDCNASYSYWTFGDIFEENGVPFTPFHGGFGLVANGMIPKPTFWTFAFFKD
LQGKCVHRSEEAVIVQAQDGSYRGIVWNLVKNTEPDRNIELNFTLPMSKECCLLVKTVDE
KCCNPLKVWHDIGEPAYPTSAQNELFRASAMPAVSTERVVVDKENITITINLSKNALAYF
EVFPVDQKSDRGYVYSK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacattattcgataacaaatgaagcaaagttttcatttagcaacaatgcacta
ttttgtattggaacaggaagaatggggcttgcacttcataaagcttaccaagaccaattg
aaatatgttcaggattacatccatttttctcatattcgtggtcatggattattttcagat
gatatggcaatttatcaggagtataaagatgagattggtaatacgattgcagagtataac
tttacgtatcttgatatggtaatggattcttatcttgaacttaggatacgtccatttttg
gaattgggattcatgccagaaaagctagcttctggagatcaaacggtattttattggaaa
ggaaatgttacaccacctaaaacctatgaaggctggacatctcttgttcaggcgacatta
cgtcacctaatggaacgctatggtaaagatgaagtggttaactggccaatagaggtatgg
aatgaaccaaatttgagcgctttttggaaagatgcagacaagcaagaatacttcaagcta
tatgaattgacagcaaaggcaataaaagatgttgataaaagatttaaagtaggaggacct
gcaatttgtggcgtggatgatgtgaattgggtgaaagattttataaatttctgtcacgaa
agttttgccccaatagatttcataacgcgacatgcttatggaacagaagaaccggaacgc
attggtcactacggatatcaagaactgcgtgagccagaggacttacttagagaattgcag
ataactagagatattgtcgatagttatgaggaatatcgtggcatggatattcacataaca
gaatttaacacttcctatataccaaattgtccattgcacgatcaaaatgtaaatgcagct
tatatagctaggcttctttctacattaggtgattgcaatgcctcatattcttattggacg
tttggagatatttttgaagagaatggtgtgccgtttactccattccatggtggatttggt
cttgttgccaatggcatgattccaaaaccgacattttggacatttgcgttctttaaagat
ttgcaaggtaaatgcgtccaccgctctgaagaggctgttattgtacaggcacaagatgga
agctatagaggtattgtttggaatttagtaaaaaatactgagccagaccgaaacatagag
ctgaattttacattaccaatgagcaaagagtgttgtctgctagttaagactgtggatgag
aaatgctgtaacccacttaaggtttggcatgatattggagaaccagcatatccgacatca
gcacagaatgaattgtttcgtgcaagtgcaatgccagcagttagtacggagcgagtggtt
gtggataaagagaatattacaattactataaatttaagtaaaaatgctttggcatatttt
gaagtctttccggtagatcagaaaagtgatagaggatatgtctattcaaaataa
DBGET
integrated database retrieval system
