Clostridium gelidum: psyc5s11_21700
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Entry
psyc5s11_21700 CDS
T08447
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cgel
Clostridium gelidum
Pathway
cgel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
psyc5s11_21700 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgel03019
]
psyc5s11_21700 (recQ_2)
03400 DNA repair and recombination proteins [BR:
cgel03400
]
psyc5s11_21700 (recQ_2)
Enzymes [BR:
cgel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
psyc5s11_21700 (recQ_2)
Messenger RNA biogenesis [BR:
cgel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
psyc5s11_21700 (recQ_2)
DNA repair and recombination proteins [BR:
cgel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
psyc5s11_21700 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
BCZ46103
LinkDB
All DBs
Position
2499925..2502384
Genome browser
AA seq
819 aa
AA seq
DB search
MENTALNVLEKYYGYKTFRRGQENIIDTIIKGQDVLAIMPTGGGKSICYQIPALILEGIT
IVISPLISLMKDQVDTLKDMGIKGALINSTLSVIEENEVINDLVNGEIKILYIAPERLES
FNFINIISRCNIAQIAVDEAHCISQWGHDFRVSYRKVASFINLLQKKPIITAFTATASEE
VREDIIKQLNLNNPKVFVTGFDRENLLINVIKGGSKKEYLNSYIENNKEVSGIIYAATRK
EVDNLYENLSAKGYNITHYHAGLSEKIRKENQENFIYDRANIMVATNAFGMGIDKPNVRY
VVHYNMPRNIESYYQEIGRAGRDGEKSECILLFAPQDVQVQKYLIENSIENIERKNNQYR
KLQQMMDFVYSNDCYRKYILEYFGEEYNKHCDNCSNCLSEGEFVDKTIEAQKVLSCIYRM
KQKFGSGMLVDVLRGSKNKKVLQFHFDEISTYGLMKEYSAEDLKNFINTLISHGYINVIE
GTYPVLNLNDRSRNVLTSKEKVQLKEFKVEKKIHEDNELFEILRAIRQNLARENNVPPYV
IFGDVTLKEMTANYPICKEAMLKISGVGEVKYSKYGKDFEDAIKEFTEEHNIEVPNYLEA
VVEPENNQPKDNDLKLEVTTDLDLYNILHIARDEFAKKENSPPQAIITMNSLKEISGRYP
ITLDKLKDVSGMGPKKISSYGETIIKIVNDYLSENNKEINWNERKRKKVIIDGETRENNQ
IAIDMLKENIDIHEISRKIELSISTILGYVTDYIKEFGENIFDINLDEFYNEEDEQLIVN
ACEKNGYNQINVLKKELPSHIKYESIRSVILIKYYNIHY
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggagaatacagcgttaaatgttttagaaaaatattatggatataagacttttagaaga
ggtcaagaaaatataattgatacaataataaaaggccaagatgtacttgctataatgcca
actggaggaggtaaatctatttgttatcagattccagcgcttatacttgaaggaatcaca
atagtaatctctccacttatatcacttatgaaggatcaagtagatactttgaaggatatg
gggatcaaaggcgcattaattaatagcacattaagtgttatagaagaaaatgaagttata
aatgatcttgtaaatggtgaaattaaaattctttatatagcgcctgaaagacttgaatct
tttaattttataaatataatttcaagatgcaatatagctcaaatagcagtagatgaggct
cattgtatatctcagtggggacatgattttagagtgagttatagaaaggtagcaagtttt
attaatttacttcaaaagaaacctataataacagcatttacagcaacggcatcggaagaa
gtaagagaagatataataaaacaacttaatttaaacaatccaaaagtctttgtaacaggt
tttgatagagaaaatttacttataaatgtaattaaaggtggaagtaaaaaagagtattta
aatagttatatagaaaataacaaagaagtttctggaattatatatgctgcaacgagaaaa
gaagttgataatttatatgagaacttgagtgcaaaaggatataatataactcattatcat
gcaggtttatctgaaaagataagaaaagaaaatcaagaaaattttatatatgatagggca
aacataatggttgcaactaatgcctttggtatgggtatagataaacctaatgttagatat
gtagttcattataatatgccaaggaatatagaaagttattatcaagagattggtagagca
ggaagagatggagaaaaaagtgaatgtatacttttgtttgcacctcaagatgttcaagtt
caaaagtatttaatagaaaattcaatagagaatattgaaaggaaaaataatcaatataga
aaacttcaacaaatgatggattttgtatatagtaatgactgttatagaaaatatattttg
gagtattttggagaagaatataataaacattgtgataactgtagtaattgtttaagtgaa
ggtgagtttgtagataaaactatagaagcacaaaaagtgctttcatgtatatatagaatg
aaacagaaattcggtagtggaatgcttgtagatgtacttagaggatctaaaaataagaaa
gtgcttcaatttcactttgatgaaatttcaacctatggattaatgaaagaatattcagca
gaagaccttaagaactttattaatacattgatttctcatggatatataaatgttattgaa
ggtacttatccagttttaaatttaaatgatagatctagaaacgtattaacatcaaaagaa
aaagtacaactaaaagaattcaaagtagaaaagaaaatacatgaagataatgaattgttt
gaaattctaagagctatacgccaaaatttagcaagagaaaacaatgttccaccgtatgtt
atatttggtgatgttacattaaaagaaatgactgcaaattatccaatatgcaaagaagca
atgcttaagatttctggagttggagaagttaaatatagcaaatatggtaaggattttgaa
gatgcaataaaagaatttacagaagaacataatattgaagtgcctaattatctagaagct
gtagtagagcctgaaaataatcagcctaaagataatgatttaaagttagaagtaactaca
gatttagacttatacaacatactacacatagcaagagatgaatttgctaaaaaagaaaat
tccccgccacaagcaattataactatgaatagtttaaaagagataagtggaagatatcca
atcactttagataaattgaaagatgtaagtggtatgggaccaaaaaaaataagctcatat
ggagaaacaataataaaaatagtaaatgattatttatcagaaaataataaagagataaat
tggaatgagagaaaaagaaaaaaagttataattgatggagaaactagagaaaataatcaa
attgcaatagatatgcttaaagaaaatattgatattcatgaaatatcaaggaagatagaa
ttatcaatttcaactattttaggctatgtaacagattatattaaagaatttggggagaat
atatttgatataaatttagatgaattttataatgaagaagatgaacagctaattgtaaat
gcttgtgagaaaaatggctataatcagataaatgtgctaaaaaaagagctcccatctcat
attaaatatgagagtataagatcagttattttaattaagtactataatattcactattaa
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