Clostridium gelidum: psyc5s11_21780
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Entry
psyc5s11_21780 CDS
T08447
Name
(GenBank) LacI family transcriptional regulator
KO
K26609
LacI family transcriptional regulator, galacturonate utilization repressor
Organism
cgel
Clostridium gelidum
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgel03000
]
psyc5s11_21780
Transcription factors [BR:
cgel03000
]
Prokaryotic type
Helix-turn-helix
LacI family
psyc5s11_21780
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Ortholog
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_4
Peripla_BP_1
LacI
HTH_7
HTH_Tnp_ISL3
HTH_3
HTH_38
DUF6305
MarR_2
HTH_24
HTH_23
HTH_Crp_2
HTH_10
MarR
Motif
Other DBs
NCBI-ProteinID:
BCZ46111
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Position
2511682..2512683
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AA seq
333 aa
AA seq
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MGITIKDIAKLANVSHTTVSRALNNSPYINEETKVKIKALAKELKYVPNYNAKSLVLLKS
YVIGVFFSSISEGTSDTFFHEIITGINNVIDKEYNLVIRGIDNYEYSHPIDNKNFDGIIV
VSQSKNDDEFIKNIIEKDIPIVVINRHIETNGIVNIMSNDTKGAYDAVDYLIKNNHKKIA
LIQGNKEYESSLYRKKGYIKALEDNNIQINEEYIISGKYNLQSGYDNMKKLIQLENRPTA
VFCLNDDIAVGAMKAVVESGLNVPNDISIIGFDDSNFCNYVTPTLTSVRKEASIMSEHGG
INLLNIIKNNNVNKEKIYIESKLVVRGSVKNLK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgggtattacaataaaagatattgcaaaacttgcaaatgtttctcacacaacagtatca
agggcacttaataatagcccttacataaatgaagagacaaaggttaaaattaaagcttta
gcaaaagaattaaaatatgtaccgaattataatgcaaaaagtttagttttgctgaaatca
tatgttattggagttttcttttcgtctattagtgagggaacatcagacacattttttcat
gagattataacgggaataaataacgtaatagataaagaatataatttagttattagaggg
atagataactatgaatattctcatccaatagataataaaaactttgatgggataatagtg
gttagtcaaagtaaaaatgacgatgaattcataaaaaatataattgaaaaggatataccg
attgtagtaattaatagacatatagaaactaatgggattgtgaatataatgtctaatgat
actaaaggagcttatgatgcagttgattatttaataaaaaataatcataagaagatagca
ttaatacaaggaaataaagaatatgagtcaagtctatatagaaaaaaaggatatattaaa
gctttagaagataataatattcagataaatgaggaatatatcataagtggtaaatataat
ttgcaaagtggatatgacaatatgaagaaattaatacaattagaaaacagaccaacagca
gtattttgtttaaatgatgatatagcagttggagccatgaaggctgttgtagaatcagga
ttaaatgttccaaatgatatttctattatagggttcgatgatagtaatttctgcaactat
gtcactccaactttaacaagtgtaagaaaagaagcatcaattatgagcgaacatggtgga
ataaatttattaaatataataaaaaataataatgtaaacaaagaaaaaatttatattgaa
tcaaagcttgtggtgagaggttcggtaaagaatttgaaatag
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