Clostridium gelidum: psyc5s11_25350
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Entry
psyc5s11_25350 CDS
T08447
Symbol
aorR
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
cgel
Clostridium gelidum
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgel03000
]
psyc5s11_25350 (aorR)
Transcription factors [BR:
cgel03000
]
Prokaryotic type
Helix-turn-helix
Other families
psyc5s11_25350 (aorR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
PAS_8
AAA_2
PAS_9
AAA_5
Mg_chelatase
ATPase
nSTAND3
PAS
GAF
AAA
AAA_7
Bac_DnaA
HTH_30
MCM
Motif
Other DBs
NCBI-ProteinID:
BCZ46468
UniProt:
A0ABM7T3J7
LinkDB
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Position
2856305..2858206
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AA seq
633 aa
AA seq
DB search
MEDYIKEAHKRSISKGILLKNSFSTKILDGFELENILDKNKELILVATPFINKLYNFVRG
SGFFAVLCDREGCILNVIGDEKILDEASELKMIKGAYMDEAHIGTNAMSLVVSEQIPIQI
SGKEHLISAYHKWTCSAAPIKDINGDIIGSIDLTGYIGNAHPHTLGMVVAAADAIEKMLK
INKYNLMLEISKKRLETTFNSISLGILTCDLIGNITTMNKQATRMFGYREHEKRKIKIPD
MIQNWNEIIEHIKARNNYIDEDIYINTKINKVQYALTLYPIYNSKMNIEEITIIIHELKK
SKKFSGKILNGQAIYTFEQVIGKNEKFMKIVAYAKKIADSKSTVLITGESGTGKEVFAQA
IHNYSIRNDDPFIAVNCGAIPRTLIESELFGYEDGAFTGAKKGGSVGKFEIAEGGTVFLD
EIGEMPIDMQVKLLRVIEAGVITRIGSSIEIPIDVRIIAATNRNLKNEVESGNFRKDLYY
RLNVLPIYLPPLREHSEDIPEFINYYMEKISKKLNKQGVNISNEYMKYLIDYDWPGNVRE
LENVIELMINSEEPVINFGDSVDEVQKIIVNLNTNVSLELMEKQHIIKVLQDVKGNMTLA
ANILEIGRNTLYRKIEKFDIDCSKIDHCSKVER
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggaagattacattaaagaggcacataagagatctatatcaaaagggatattattaaaa
aattcgtttagtactaagatattagatggttttgaacttgaaaatatactagataaaaat
aaagaacttattttagtagcaacaccttttataaataagttgtataactttgtgagagga
tctggtttttttgcggtattatgcgatagagaaggttgcattttaaatgtaataggagat
gaaaaaatattagatgaagcttcagagctcaaaatgattaaaggtgcatacatggatgaa
gctcatattggaactaatgcaatgagccttgtagtatcagaacaaataccaattcagatt
tctggaaaggaacatttaatttctgcatatcataaatggacgtgttctgcagcacctatt
aaggatataaatggagatattattggaagtattgacttaactggatatataggaaatgct
catccacatacattgggaatggtagttgctgcagcagatgcaatagaaaaaatgcttaaa
ataaacaaatataatttaatgcttgaaatttcaaaaaaacgattagaaacaacctttaat
tcaatttctttaggaattttaacttgtgatttaattggaaatattacaaccatgaataag
caagcaacaagaatgtttggttacagagagcatgaaaagagaaaaatcaaaattcctgat
atgattcaaaactggaatgaaataattgaacatattaaagccaggaataactatattgat
gaagatatatacataaatacaaaaatcaataaagtacaatatgctcttactttgtaccca
atatacaattcgaaaatgaacattgaagaaattactattataattcatgaattaaaaaag
agtaagaagttttctggaaaaatattaaatggacaagctatatatacatttgaacaagtt
atcgggaaaaatgaaaaattcatgaagattgttgcttatgctaaaaagattgcagacagt
aaatctacagtattaataactggagaaagtggtactggaaaggaagtttttgctcaagct
attcataattatagtatccgcaatgatgacccttttattgcagtaaattgtggtgcaatt
ccaaggacgcttatagaatcagaattatttggttatgaggatggagcatttactggagcg
aaaaaaggtggtagtgttggtaaatttgaaatagctgagggaggtacggttttcttagat
gaaataggagaaatgcctattgatatgcaagttaaattattaagagtaattgaagcaggt
gtgataactagaataggaagttcaatagaaatacctattgatgtaagaattatagcagcc
acaaatagaaatcttaaaaatgaagtagaaagcggtaattttagaaaagatctttattat
aggttaaatgttttgcctatatatttaccacctcttagagaacacagtgaagatatacca
gaattcataaattattatatggagaaaatttctaaaaagcttaataagcaaggtgttaat
atttctaatgaatatatgaaatatcttatagattatgactggcctggaaatgtaagagaa
ttagaaaatgtaatcgaactaatgataaattctgaagagccagttattaattttggtgat
agtgtggatgaagttcaaaagattatagttaatttaaacacaaatgttagtttggaactg
atggaaaaacagcatataattaaagttttacaagatgtgaaaggaaatatgaccttagct
gcaaatatattagagatcggaagaaacactttatatagaaaaattgaaaaatttgatata
gattgttccaaaattgatcactgttctaaagtggaacggtaa
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