Clostridium gelidum: psyc5s11_29450
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Entry
psyc5s11_29450 CDS
T08447
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
cgel
Clostridium gelidum
Pathway
cgel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
psyc5s11_29450 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgel03400
]
psyc5s11_29450 (xseA)
Enzymes [BR:
cgel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
psyc5s11_29450 (xseA)
DNA repair and recombination proteins [BR:
cgel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
psyc5s11_29450 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF5394
RecJ_OB
DUF4920
Motif
Other DBs
NCBI-ProteinID:
BCZ46878
UniProt:
A0ABM7T6A9
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All DBs
Position
complement(3292242..3293450)
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AA seq
402 aa
AA seq
DB search
MNIKTLTVSEVTNYIKRMLDNDFILSNLSVKGEISNLKYHGSGHIYFTLKDSNGKVNCVM
FKGNALLLDFDLEEGMEVVIKGRASIYPATGSFQLYCDEIKKEGLGDLFIKFEKLKEKLS
KAGYFDEANKKPLPRFSEKIGIVTSPTGAAIKDIINVATRRSTLVDLVLYPAAVQGIGAY
KEIIKGINYFNKTKSVDVIIIGRGGGSIEELWNFNEEELAKAIFNSKIPIISAVGHEIDF
TISDFAADVRAATPSQGAEIAVALSSDIQAKVCDISKILDKRIDNKLKECRIDLSGAERI
LNIHSPIAKISNSYLELDKLQDRLNFVIKTKLKREKNKIENFNNLLIAHNPVNVIRKGYA
IIEDNEKKLITSKEQLKETINLKICLKDGSVEGKFVPEQYVK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaatattaagacgttaactgtttctgaggttacgaattacataaaaagaatgttagac
aatgactttattttaagcaatctctctgtaaaaggggagatttctaatttaaaatatcat
ggtagtgggcatatttatttcactcttaaggatagcaatgggaaagtaaattgcgttatg
tttaaaggaaatgcacttttacttgattttgatttagaagaaggcatggaagttgtaatt
aagggaagagcatctatatatcctgcaactggaagctttcaactttattgtgatgaaata
aaaaaagaaggtcttggagatttatttattaaatttgaaaagcttaaagaaaaattgtct
aaagcaggatattttgatgaggctaataaaaaaccattacccaggttctctgaaaaaata
ggaatagtaacatcacctactggagcagcaattaaagatattataaatgttgcaactaga
agaagtactttggttgatttggtattatatccagctgcagttcaaggcattggtgcctat
aaagaaataattaaaggtattaattattttaacaaaacgaagtctgtggatgtaataata
ataggtcgtggtggtggatctatagaagaattatggaattttaatgaagaagaattagct
aaagctatttttaattcaaagatacctataatttcagcagtaggtcatgaaatagatttt
actatttcagattttgcagcagacgttagggctgcaacaccatcacaaggagcagaaata
gcagtggccttgagcagtgatatacaagctaaagtttgtgatatctctaaaatattagat
aaaagaatagacaataaattaaaagagtgtagaattgatttatctggagcagaaagaatt
ttaaatattcattcgccaatagctaaaatatctaattcatatttagaattagataaatta
caagatagattaaactttgtaataaaaacaaaacttaaaagagaaaaaaataaaatagaa
aatttcaataatttacttatcgctcataatccagttaatgttatacgcaaaggatatgct
ataatagaggacaatgaaaaaaaattaattacatcaaaagaacaattaaaagaaacaatt
aatttaaagatttgtcttaaagatggaagcgtagaaggaaaatttgtgccagaacaatat
gtaaaataa
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