Clostridium gelidum: psyc5s11_30680
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Entry
psyc5s11_30680 CDS
T08447
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cgel
Clostridium gelidum
Pathway
cgel00300
Lysine biosynthesis
cgel00470
D-Amino acid metabolism
cgel01100
Metabolic pathways
cgel01110
Biosynthesis of secondary metabolites
cgel01120
Microbial metabolism in diverse environments
cgel01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
psyc5s11_30680 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
psyc5s11_30680 (dapF)
Enzymes [BR:
cgel01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
psyc5s11_30680 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BCZ47001
UniProt:
A0ABM7T7R8
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Position
complement(3382597..3383424)
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AA seq
275 aa
AA seq
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MDFYKMQGAGNDFVFIEDFNYNIKDECELAKKLCDRHFGIGADGLVIVRKSEAANAKMVI
INADGSRANMCGNAIRCFGKYVYEHKITSGNKFSVETGDGIKEIEIILESNKVKYVRVYM
GNPSYDGGDIPLNNIESLIQQEIKVNNNTYNITTVLMGVPHTIIFEKDREYNVVEEGSKI
EKLELFKEGSNVNFVKVIDETHIRVNTWERGAGFTLACGTGCSAAVVVAKKLGLVDKNKE
IFVLAPGGELIIEVLGEDVYMKGPAEVSFEGKTSL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggatttttataaaatgcaaggtgcgggaaatgattttgtatttattgaagattttaat
tataatattaaagatgaatgtgaactagctaagaaactttgtgatagacattttgggatt
ggagctgatggtttagttattgtgaggaaatcagaagcagctaatgctaagatggttata
ataaatgcagatggttcaagagctaatatgtgtggaaatgctataagatgttttggaaag
tatgtttatgaacataaaataacaagtggaaataaattttcagttgaaactggcgatgga
attaaggaaattgaaataatattagaaagcaataaagttaaatatgtaagagtatatatg
ggaaatccatcttatgatggtggtgatatacctttaaataatatagaaagtcttatacag
caggaaattaaggtaaataacaatacttataatattactacagtactcatgggagtacct
catacaattatttttgaaaaagatagagaatacaatgtagtagaagaaggttctaaaata
gaaaaacttgagttatttaaagaaggaagtaatgtcaattttgtaaaggtaattgatgaa
acgcatataagagttaatacctgggagagaggtgcaggttttacgctagcttgtggaact
ggatgttcagcagctgttgttgtagctaaaaaattaggacttgtagataaaaacaaagaa
atttttgttttggcaccaggtggtgaattaatcatagaggttttaggggaagatgtatat
atgaaaggacctgcagaagtatcttttgaaggtaagacttctttgtaa
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