Clostridium gelidum: psyc5s11_39230
Help
Entry
psyc5s11_39230 CDS
T08447
Name
(GenBank) DNA-binding response regulator
KO
K07707
two-component system, LytTR family, response regulator AgrA
Organism
cgel
Clostridium gelidum
Pathway
cgel02020
Two-component system
cgel02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
psyc5s11_39230
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
psyc5s11_39230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cgel02022
]
psyc5s11_39230
Two-component system [BR:
cgel02022
]
LytTR family
AgrC-AgrA (exoprotein synthesis)
psyc5s11_39230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LytTR
Response_reg
DUF6501
DUF7294
Motif
Other DBs
NCBI-ProteinID:
BCZ47856
LinkDB
All DBs
Position
4275775..4276506
Genome browser
AA seq
243 aa
AA seq
DB search
MNNIIICEDNIHERKQLISILNSEIEKFDCKIALSTGNPYEVIRHIDNRTSSFIYFLDID
LNSDLNGFELAKLIRTYDPNGYIIFLTGHAELTLLTFQYKVQALDYIIKGDINVLKTKVS
DCLIAVHNNLTAANTKVDNTISIDVGNNILFLDFKDILFFETAGTEHKISVHTHNGQSEF
YGTLKNIEKTVSSDFYKTHRSYLVNTKKIKSIDKSNMVIEMTNDEMCYVSLRYLKGLLKK
CLH
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgaataacattataatttgcgaagataatatccatgaaagaaaacaacttatatctatt
ctcaattctgaaattgaaaaattcgattgtaaaattgctctttctacaggtaatccttat
gaagttattcgacatattgataatcgtacaagtagttttatatattttttagatattgat
ttaaatagtgaccttaatggttttgaattagcaaaattaataagaacttatgatcctaat
ggatatattatatttttaacaggtcatgctgaattaaccttacttacttttcaatataaa
gtacaagctcttgattatataattaaaggagatattaatgtattaaaaactaaagtttca
gattgtcttattgcggtacataataatttaactgctgctaacacaaaagttgataataca
atttcaatagatgttggtaacaatatactttttttagattttaaagatattttatttttc
gaaactgctggtacggagcataaaatttctgttcacacacataatggtcaatcagaattt
tatggtaccttaaaaaatattgaaaaaacagtatcttctgatttttacaaaactcataga
tcctatttagttaatacaaaaaagataaaatctatagataaaagtaatatggttatagaa
atgacaaatgatgaaatgtgttatgtatcattacgatatttaaaggggttgttgaaaaaa
tgcctacattag
DBGET
integrated database retrieval system
