KEGG   Clostridium gelidum: psyc5s11_40740
Entry
psyc5s11_40740    CDS       T08447                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
cgel  Clostridium gelidum
Pathway
cgel00740  Riboflavin metabolism
cgel01100  Metabolic pathways
cgel01110  Biosynthesis of secondary metabolites
cgel01240  Biosynthesis of cofactors
cgel02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:cgel00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    psyc5s11_40740 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    psyc5s11_40740 (ribD)
Enzymes [BR:cgel01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     psyc5s11_40740 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     psyc5s11_40740 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD DUF498
Other DBs
NCBI-ProteinID: BCZ48007
LinkDB
Position
complement(4439631..4440719)
AA seq 362 aa
MDEKYMEKALELAAMGIGKVNPNPLVGAVIVKNGQIIGEGYHECYGEAHAERNAVKNAVE
PVEGSTIYVTLEPCAHYGKTPPCVDLIIEKKFKRVVIGMLDPNELVSGKSIEKLKEHGIE
VEVGVKEEECKKLNEIFIKYITSKIPFVVLKSAISLDGKIATYSGESKWITSKESREDAQ
NLRNRLSSIMVGVNTVIADDPFLTCRVNNEKRLIRIVLDTNLRIPLDSKLVKNNDKLTIV
ATTLSSSEEKKQSLRDLGVKVIEVSKKNDRVNLKELVKSLGQEGVDSILIEGGGTLNFSA
LEEDIVDKAIFYIAPKILGGENSKSCIAGMGFSKLDDAVNLKNLSYRKIGEDLVVEGYIR
HS
NT seq 1089 nt   +upstreamnt  +downstreamnt
ttggatgaaaaatatatggaaaaagccctggaattagctgcgatgggaattgggaaagta
aatcctaatccattagtaggtgctgttatagtaaaaaatggtcaaataataggagaagga
taccatgaatgttatggtgaagctcatgcggaaagaaatgctgtgaaaaatgcagtggaa
ccagtagaaggtagtactatttatgttacattggaaccttgtgcccattatggaaaaaca
cctccatgtgtagatttaataattgaaaagaaattcaaaagagttgtaataggaatgtta
gacccaaatgaactagtttccggaaaaagtattgaaaaattaaaagaacatggaattgaa
gttgaggttggggttaaagaagaagaatgcaaaaagttaaatgagatatttataaaatat
attacatcaaaaattccatttgtagttttaaaaagtgctatatcattagatggaaaaata
gcaacctatagtggagaatctaaatggattacttctaaagaatctagagaagatgcacaa
aatttaaggaatagattgagttcaattatggtaggtgttaacacagttattgctgatgat
ccatttcttacatgcagagttaataatgaaaagagattaataagaattgttttagatact
aatcttaggattccactagattcaaaattagttaaaaataatgataaactcactattgtt
gcaactacattaagctcaagtgaagagaagaaacaatctttaagagacttaggagttaag
gttatagaagtttcaaaaaagaatgatagagtaaatttaaaagaacttgtaaaaagccta
gggcaagaaggtgtagattctatacttattgaaggtggaggaacattaaatttttctgca
ctggaagaagatatagtagataaagcaattttttatatagctcctaaaatattaggtgga
gaaaatagtaaaagctgtatagctggaatgggtttttctaaattagatgatgcagttaat
ttaaagaatttgagttatagaaaaattggtgaagatttagtagttgaaggatatataagg
catagttaa

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