Clostridium gelidum: psyc5s11_41260
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Entry
psyc5s11_41260 CDS
T08447
Symbol
smc
Name
(GenBank) chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
cgel
Clostridium gelidum
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgel03036
]
psyc5s11_41260 (smc)
Chromosome and associated proteins [BR:
cgel03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
psyc5s11_41260 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
AAA_27
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BCZ48059
LinkDB
All DBs
Position
complement(4492700..4496263)
Genome browser
AA seq
1187 aa
AA seq
DB search
MFLKSLEIRGFKSFADKTELKFRKGVTAVVGPNGSGKSNISDAVRWVLGEQSVKVLRGGK
MEDVIFSGTQFRKAVGLAQVSLTLDNSDEQLATEYNEVTISRRIFRSGDSEYLINNSKCR
LKDVTNLFMDTGIGKEGYSLIGQGKIEAILSGKAEERRSLVEEAAGIVKFKTRKEEAEKK
LSNTDDNLVRINDILSTYEERIEPLRIEREKALEFNELSKDLKTKEVSLIVHTIKNMEEE
LKNFNEDLELKINGIEDKRKEMVSDKEKLKVLEYKIEEIEKKNLEEKEQYYNLKEIVSDD
EKSVELYKERIKSFEEKINRNNYEVSDIGVKIREINESKIILEAELAKKLEEQKFKNQDI
EKLEESNVKSSIELKSIEEELKALKEGEFELLRSNSDIKNEITILNKDISLREEKRETLN
SSISSLEHNIVINLATYKGLSNDIESKKDNIKLLSLQIVEDKKKISSLSSDLTKKENDLR
ELNRILTKLDANKVMLENLEKHYEGYNRSVKSLMESIHEEKITSASDTKVLGEVFTAPKN
YETAIEIALGAAISNVITKNEEIAKVLIGYLKKNNLGRATFLPLNIIRGRKLDLDKNITS
ANGYIGIGSDIISYDKEYKNIIDYVLGRTIICTNMDCALNIARIGKYNYKIVTLDGEVLN
PGGSLTGGSIKGKNSNVLGRKREIEELTKDIHRKKEFYEEAVKVVQDIKEEIKKLDEDIL
NKRDEVHEKSIELTKKESEIQGLGDETDKLKRNLEVSKEEIERIVNEKEIILKKLIIKEN
EIKSIENENTFNKSKSIDLEEIIIVKVQEVNDNDTKLTEMKINKATLDEAIQNRKNEFTR
LGKEIQDIAIKSELLNKENTENKNSIESLNLEIEVRNNNIKENIIDIEKLELNFKDQEII
KEKLKQEFKEKDNIISGILDEIRVKEMEVNKREVVKAKKEADKEHMYRKLNEELELTYAE
ALDICEPVIDDEALKQEIYTTKGKITKLGVVNLAAIEEYEEIKDKYEFMSTQAEDLENAK
KELKSVIEEMTGEMKVLFRDNFRILNYNFNETFKELFKGGSAELILGEGDELTANIDINV
EPPGKKLQNINLMSGGEKVLSAIALLFAILKMKPTPFCILDEIEAALDDANVYRYAEFLK
LFSKNTQFIIITHRKGTMEVSDIIYGVTMEEKGISKVVSVDLSENFI
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
ttgtttttaaaatctctggaaataagaggatttaaatcctttgctgataaaacagaatta
aaatttagaaaaggtgtaacagcagttgtaggtcctaatggaagtgggaaaagtaatatt
tctgatgctgtaagatgggtacttggagaacaaagtgttaaggtactccgaggtgggaag
atggaagatgtaatattttcaggaactcagtttagaaaggctgttggactcgcacaagtt
tcactaactcttgataatagtgatgaacaattagcaacagaatataatgaagtgacaata
tctagaagaatatttaggtcaggagactctgagtatttaattaataattcaaaatgcaga
cttaaagatgtaacaaatctttttatggatacaggaataggtaaagaaggatattcacta
attggacaaggtaagattgaagctattttaagtggtaaggctgaagaaagacgatctctt
gtagaagaagcagcaggtattgtaaaatttaagactagaaaagaagaagcagaaaaaaag
ttgagtaatactgatgataatttagttagaataaatgatattttatcaacttatgaagag
cgaatagagcctttaagaattgaacgagaaaaggcattagagtttaatgaattatctaaa
gacctaaaaacaaaagaagtatcacttatcgtccatactataaagaatatggaagaggaa
ctaaaaaactttaatgaagatttagaattgaaaattaatggtattgaagataaacgaaaa
gaaatggttagtgataaagaaaaacttaaggttttagaatacaaaatagaagaaatagaa
aagaaaaatttagaagaaaaagaacaatattataatttgaaagaaatagtaagtgatgat
gaaaaaagtgttgaactttacaaggaaagaatcaagagttttgaagagaaaatcaataga
aataattatgaagtaagtgatattggagttaaaataagagaaataaatgaaagtaaaata
atattagaagcagaattagctaaaaagctagaagagcaaaagttcaaaaatcaagatatt
gaaaagttagaagaaagcaatgtgaaaagttctatagaacttaaaagcatagaagaagaa
cttaaagctttaaaagaaggcgaatttgaactcttaagaagtaattcggatataaaaaat
gagattactatattaaataaagatatttcacttagagaagaaaaaagagaaactttaaat
tcatctatatcatctttagagcataacatagtgattaatttggcaacttataaaggatta
agtaatgatattgaaagtaagaaagacaatatcaagttattaagtctacaaatagtagaa
gataagaaaaaaataagttcattatcttcagatttgactaaaaaggaaaatgaccttaga
gaattaaatagaatattaactaaacttgatgcaaataaggttatgctagaaaacttagag
aagcattatgaggggtataataggtctgtaaaatcattgatggagtcaatccatgaggaa
aaaattacttctgcttccgatactaaagttttaggtgaagtttttacagctccaaagaat
tatgaaacagctatagaaatagcattaggagctgcaatatctaacgtaataacaaaaaat
gaagaaatagctaaagttcttattggatatttgaaaaaaaataacttaggaagagcgaca
tttttgccgttaaacataataagaggcagaaaattagatttagataaaaacattacgtca
gctaatggctatattggcattggaagtgacataatttcttacgataaagagtataaaaat
ataatagactacgttcttggaagaacgataatttgtactaatatggattgcgctttaaat
attgcacgtattggaaaatataattataagattgttactttagatggagaagtattaaat
ccaggaggatcattaactgggggcagcataaaaggaaaaaattctaatgttctaggtaga
aaaagagaaatcgaagaattaacaaaagatatacatcgtaaaaaggaattttatgaagaa
gcggtaaaagtagttcaagatattaaagaagaaatcaaaaagttagatgaagatatatta
aataaaagagatgaagttcatgaaaaaagtattgaattaactaaaaaagaaagtgaaatt
caagggctaggtgatgagactgataaattaaaaagaaatttagaagtatctaaagaagag
attgaaagaatagtaaatgaaaaagaaattatattaaaaaagcttataattaaagaaaat
gaaattaaatctattgaaaatgaaaatacatttaataaaagtaaaagtatagatttagaa
gaaataataatcgtaaaagtacaagaagtaaatgacaacgatacgaaacttacagaaatg
aaaataaataaggcaactttagatgaagctatacaaaatagaaaaaatgaatttacgcgt
ttgggaaaagaaattcaggatatagctattaaaagtgaacttttaaataaggaaaatact
gaaaataaaaatagtattgaaagtttaaatttagagatagaagttagaaataataatata
aaagagaatattattgatattgaaaaattggaattaaattttaaagatcaagaaataata
aaagaaaagttaaagcaagaatttaaagaaaaagataatataataagtggtattttagac
gaaattagagtaaaagaaatggaagttaataaaagagaagtagttaaggctaaaaaagaa
gctgataaagaacacatgtatagaaaacttaacgaagaattagaactaacatatgcagaa
gctttagatatatgcgaaccagtaattgatgatgaagctttaaaacaagagatttatact
acaaagggtaaaataacaaagcttggagtggtaaatttagccgctatagaggaatatgag
gaaataaaagataagtatgagtttatgtcgacgcaagcagaagatttagagaatgctaaa
aaagaattaaaatctgttatcgaagagatgacgggtgaaatgaaagttttgtttagggat
aattttagaattttaaattataattttaatgaaacttttaaagagctatttaaaggtgga
agtgcagaacttatattaggtgaaggtgatgaacttacagctaatattgatataaatgta
gagccaccagggaagaaacttcaaaatattaatttaatgtcaggtggagaaaaagtttta
tctgcaatagcattactttttgcaattttaaaaatgaagccaactccattttgtatacta
gatgaaattgaagcagcactagatgatgctaatgtatacagatatgcagagtttctaaaa
ctgttttctaagaatactcagtttataattataactcatagaaaaggcactatggaagtt
agtgatattatatatggggtaactatggaggaaaaaggaatatctaaagtagtatcagta
gacttatcggaaaattttatttag
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