Clostridium gelidum: psyc5s11_42690
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Entry
psyc5s11_42690 CDS
T08447
Symbol
treR
Name
(GenBank) GntR family transcriptional regulator
KO
K03486
GntR family transcriptional regulator, trehalose operon transcriptional repressor
Organism
cgel
Clostridium gelidum
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgel03000
]
psyc5s11_42690 (treR)
Transcription factors [BR:
cgel03000
]
Prokaryotic type
Helix-turn-helix
GntR family
psyc5s11_42690 (treR)
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GFIT
Motif
Pfam:
UTRA
GntR
HTH_11
Rrf2
HTH_Crp_2
Fe_dep_repress
HTH_36
HTH_DeoR
CvfB_WH
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BCZ48202
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Position
4635489..4636208
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AA seq
239 aa
AA seq
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MPNVKFKDIYHTLKANIDNGKYDISMMLPTEMELIGKFNCSRNTVRRAIGELSKDGYVES
VKGKGVIILESRESIELPIGNLLGLQELHLKKKFTTSVVNFSRITIDESLSKKTALKLNT
EVYHLHRIRFFDNEPIILDVNYFSAEVVKDLTIEIAQNSVYEYIEKELHTKILASKKVIV
VEHANELDKSFLDLGTFDCVAVVKTYAYTDSGKLFEYTESRHRPDKFVFVESSSMRKIE
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
ttgcccaacgtaaaatttaaagatatatatcacacattaaaagccaatatagataatgga
aaatatgatatttccatgatgcttcctacagaaatggaactaataggaaaatttaattgt
agtagaaatactgttagaagagctattggtgagttaagtaaggatggctatgttgaaagt
gttaaaggtaagggagttattatattagaaagtagagaatcaatagaacttcctattgga
aatttattaggcttacaagaattgcacttaaaaaagaaattcactactagtgttgtaaat
ttttcaagaataaccatagatgaatctttgtcaaaaaaaactgctttaaagttaaatact
gaagtatatcatcttcatagaataagattttttgataatgaacctataattcttgatgta
aattactttagtgcagaagttgtaaaagatttgaccatagaaatagctcaaaattctgta
tatgagtatattgaaaaagaactacatacaaaaattcttgcttcaaaaaaggttattgtg
gttgagcatgcaaatgaattagataaaagctttttagatttaggaacatttgattgtgtt
gctgttgtaaaaacatatgcttatactgattctggtaagctttttgaatatactgaatct
cggcatagaccagataaatttgtattcgtcgagtcttcatctatgagaaaaattgaatag
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