Clostridium gelidum: psyc5s11_44030
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Entry
psyc5s11_44030 CDS
T08447
Symbol
birA
Name
(GenBank) bifunctional ligase/repressor BirA
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
cgel
Clostridium gelidum
Pathway
cgel00780
Biotin metabolism
cgel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
psyc5s11_44030 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgel03000
]
psyc5s11_44030 (birA)
Enzymes [BR:
cgel01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
psyc5s11_44030 (birA)
Transcription factors [BR:
cgel03000
]
Prokaryotic type
Helix-turn-helix
Other families
psyc5s11_44030 (birA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
HTH_24
BPL_LplA_LipB_2
LplA-B_cat
HTH_36
MarR_2
HTH_34
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
BCZ48336
UniProt:
A0ABN6J1V2
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All DBs
Position
4782248..4783222
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AA seq
324 aa
AA seq
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MEDKILDELKRAENYISGEYLSLTLNVSRSAIWKHIKNLKSKGYIIDGISNKGYKLISSP
DLLNKSELFPLLKTSIIGKNIIHFDDIDSTNIKAKELAQKNIVDGSIIIAEKQTLGSGRF
NRKWFSPSGGLWFTLVLRPTIPPTEAPKITQIAAASIYKTLKDFNINTTIKWPNDILLND
KKLCGILAEMKCDMDSVHYLILGIGMNINIDESAFDESVKCIATSLKLQYNKQFERREIL
AGFLSHFETLYNKFVYNFDLSETISICREHSNIFGKQAKLITYNTEEIVTCISLSDTGDL
IVKDSNGNEKFVLAGEISFNGLNN
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggaagataaaattttagatgaattaaaaagagctgaaaattatatttctggtgaatat
ttaagtttaacattaaatgtttcaagaagtgctatatggaaacacataaaaaatttgaaa
tcaaaaggctatataatagatggaatatcaaataagggttataaattaatttcttctcct
gatttattgaataaaagtgaacttttccccttattaaagacatctataatcgggaaaaat
ataattcactttgatgacatagattctacaaacattaaagcaaaagaacttgctcaaaaa
aacattgtagatggtagtataataattgcggaaaaacaaactcttggcagtggacgtttc
aatagaaagtggttttctccaagtggtggactttggtttactttagtcttaaggccaacc
attcctccaactgaagctcctaaaattactcaaattgctgctgcttcaatttataaaact
ttaaaagattttaatattaacacaacaataaagtggcctaacgacatacttcttaatgat
aaaaaactttgtgggatactcgctgaaatgaaatgtgatatggatagcgtacattattta
attttaggtataggtatgaatattaatatagatgaaagtgcttttgatgaaagcgtaaaa
tgtattgcaacctctctgaaacttcaatataataaacaatttgaaagaagagaaatactt
gcaggatttttaagtcactttgaaacattatataataaatttgtatataattttgatctt
tctgagacaatttcaatttgtagagagcactcaaatatatttggaaaacaagcaaaattg
attacatataatactgaagaaattgtcacttgtatttctttatcagatactggggatctt
attgtgaaagacagtaatggaaatgaaaaattcgtacttgctggcgaaataagtttcaat
ggattgaataattaa
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