Clostridium gelidum: psyc5s11_51310
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Entry
psyc5s11_51310 CDS
T08447
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cgel
Clostridium gelidum
Pathway
cgel03420
Nucleotide excision repair
cgel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
psyc5s11_51310
03430 Mismatch repair
psyc5s11_51310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgel03400
]
psyc5s11_51310
Enzymes [BR:
cgel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
psyc5s11_51310
DNA repair and recombination proteins [BR:
cgel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
psyc5s11_51310
MMR (mismatch excision repair)
Other MMR factors
psyc5s11_51310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
SLFN-g3_helicase
Viral_helicase1
PhoH
DEAD
AAA_30
nSTAND3
ResIII
AAA_11
NACHT
AAA_14
zf-C2H2_aberr
NPHP3_N
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
BCZ49064
LinkDB
All DBs
Position
complement(5580709..5582910)
Genome browser
AA seq
733 aa
AA seq
DB search
MDKQVDFLREENKLNEILDILNKEILNYVEKRKGVTKYILDSRKKYIEEYKDDDDQVIDY
FDHENYVQEESYRTIDKRLMEYTKLKEAPYFGKVTFKENEDVPEDMYVGRYGLTLEDSYE
PLIVDWRAPIAALFYKGALGKASYNPPMGEIDADILSRKQLIVKKGELKGVFDSALDVKD
EILQMVLTENSSDKLKDIVMTIQREQDEIIREDRNKVVVVNGVAGSGKTTIALHRISYLL
YNFRKQFGDKVLIFGPNDIFMDYIAQVLPTLGEGNIKQSTFENFAKKELGLENIKVKTFG
SYIEDAMNGNETALEEYKYKSSKEFLELLNSSIQALDKEYFEIQAIKFKNTEIVSTKEIE
ELFTVHYKDMPLFRRSEKIKRILIVKIKDKRDEEVYKLNAEIKEKTDNLSKDELEMEKSN
IEYMKRIKIREIIREVIICRNELDAWIKIEPMIDIYKKMVNSKGIKEDTLDNVDNIILRT
ILNDNNEVLKEEANNLGYMDLAGMLYFMVKLQGIKVKDEIKHIVIDEAQDYSFIQFEIIK
EITGCKSYTIVGDSNQRLITTSKEPAMLHLDEVFKDSNIEIKKYELNKSYRSTQEIMEYA
NQFLNEEKIIPLVRSGEPVIQEETSSEEDFVNTLISIIEDYEEDGYENIAVIFKGKKELN
KFAHLIKERINIQNLDNEDILYKGGKVLIPAYLAKGLEFDGVIVVENGEIQPLVKYIMCT
RALHRLSIIKDLI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
ttggataaacaagtagatttcttaagagaagaaaataaattaaatgaaattttagatata
ttaaataaggaaattttgaattatgtagagaaaagaaaaggtgttacaaaatacattctt
gactctagaaagaaatatattgaagaatataaagatgatgacgatcaagttatagattac
tttgatcatgaaaactatgttcaagaagaatcatataggacaatagataaaaggcttatg
gaatatacaaaacttaaggaagcaccttactttggaaaggttacttttaaggaaaatgag
gatgttccagaagatatgtatgtaggcagatacggattaactttagaggacagttatgaa
cctttgattgttgattggagagctccaattgcagcccttttttataaaggagcacttgga
aaagcaagttataacccgccaatgggggaaatagatgcggatatattatcaagaaaacag
ctaatagttaaaaaaggtgaattgaaaggtgtatttgattcagcattagatgttaaggat
gaaatacttcaaatggttttaactgaaaattcatctgataagttaaaagatatagtgatg
actattcaaagggaacaagatgaaattattagagaagatagaaataaagtagttgttgta
aatggtgttgcaggttcaggtaagacaactattgcacttcatagaatttcttatttgctt
tataactttagaaaacaatttggagataaggtattaatttttggacctaatgatattttc
atggattatatagctcaagtactgcccactcttggtgagggtaatataaaacaaagtact
tttgagaattttgcaaagaaggaacttggcttagaaaatataaaagtaaagacttttgga
agttatattgaagatgctatgaatggaaatgaaactgcattagaagaatataagtataaa
agttctaaggaatttttggagttattaaattcaagcatacaagcattagataaagaatat
tttgaaatacaagcaattaaatttaaaaacacagaaattgtttcaactaaagaaatagaa
gaattattcactgttcattataaagatatgcctttgtttagaagaagtgaaaagataaaa
agaatactaatagttaagattaaggataaaagagatgaagaagtttataaattaaatgct
gagattaaggaaaagacagataatttatcaaaagatgaattagaaatggaaaaaagtaat
atagaatacatgaaaagaattaaaataagagaaattataagagaggttataatttgccgt
aatgaattagatgcttggattaaaattgagccaatgatagatatttataagaaaatggtt
aattcaaaaggaattaaagaagatacgttggataatgtagataacatcattttgaggaca
attttaaatgacaataatgaagttttaaaagaagaagcaaataatttaggatatatggat
ttagcaggaatgctttattttatggtgaaattacaaggaataaaggtaaaggacgaaata
aaacacattgtaattgatgaagcacaagattatagttttatacaatttgaaatcattaag
gaaataacaggatgcaaaagttatacaatagttggagattctaatcaaagattaatcaca
actagtaaagaacctgcaatgcttcatttagatgaagtctttaaggattctaatattgaa
attaagaaatatgaattaaataagagctatagatcaactcaagaaataatggaatatgca
aatcaattcttaaatgaagaaaaaataattccgttagttagaagtggagagcctgttatt
caggaggaaacttcaagtgaggaggactttgtaaatactcttatatcaataattgaggat
tatgaagaagatggatatgaaaatattgcagtaatatttaaaggtaagaaggaattaaac
aaatttgcccatcttattaaagaaagaattaatatacaaaatctagataatgaagatatt
ctttataagggcggaaaggtacttataccagcttatttagcgaaaggtctagaatttgat
ggtgtaatagtagtggaaaatggagagattcagcctttagttaagtatataatgtgtact
agagcattgcatagattatctataattaaagatttaatataa
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