Clostridium gelidum: psyc5s11_51570
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Entry
psyc5s11_51570 CDS
T08447
Symbol
kdgR
Name
(GenBank) KDG operon repressor
KO
K02525
LacI family transcriptional regulator, kdg operon repressor
Organism
cgel
Clostridium gelidum
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgel03000
]
psyc5s11_51570 (kdgR)
Transcription factors [BR:
cgel03000
]
Prokaryotic type
Helix-turn-helix
LacI family
psyc5s11_51570 (kdgR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_4
Peripla_BP_1
HTH_3
HTH_26
HTH_7
HTH_17
HTH_10
HTH_19
HTH_24
HTH_38
HTH_Tnp_ISL3
HTH_DeoR
IMPDH
DUF977
HTH_31
HTH_23
HTH_IclR
KfrA_N
MarR_2
Motif
Other DBs
NCBI-ProteinID:
BCZ49090
LinkDB
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Position
complement(5612017..5613066)
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AA seq
349 aa
AA seq
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MLKSSVDKQKNITIVDVAAYVGVSKTTISRYLNKNFEFMSRETQEKIDEAIKVLKYRPNR
IAQTLKAKNKNIIGVTIADIGNPFSSLLIKGINNVCRAKNYQVLVTNADNIDEQEKENIE
SLLDSQVDGLLVNTTGNNYEYIKEFKNRDNYKPIVLLDRFISPLICDSVTTNNVDVTKNI
LNELLKNEYNHYVFFSEDINGISPRLDRKKGMEEFLSEYSFINGETIIIKKEEIIDIQEK
IKTILNENKGKNTCFFANNDEILKVLIECLFDLKINIGIDVGIFGFADEKWARLIGPGIT
SIDQNPYKIGERAATLLFERIDGSRTTEFVLEEIPATIHLHYSTNIIKK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaagttctgtggataaacaaaaaaatattacaattgtagatgttgcagcttat
gtaggagtttcaaagacaacaatatctagatatttaaataaaaatttcgaatttatgtca
agggaaactcaagaaaaaatagatgaagcaattaaagtactaaaatatagaccaaaccgc
atagcgcaaacattaaaagctaaaaataaaaatataattggtgtaacaatcgcagatata
ggtaatcctttctcttctttacttattaaaggaataaataatgtatgtcgtgcaaagaat
tatcaagtacttgttacaaatgctgataatatagatgaacaagaaaaggaaaatatagaa
tctttactggacagtcaagttgatgggttgctagttaatacaacgggtaataactatgaa
tatataaaagaatttaaaaatagggataattataaacctatagtattattagatagattt
ataagcccattaatttgcgactcagtaacaacaaataatgtagatgtaacaaaaaatata
ttaaatgaattattaaaaaatgaatataatcactatgtatttttttcggaggatataaat
ggtataagtcctagattagataggaaaaagggaatggaagaatttttatctgagtattca
tttataaatggagagactattattattaaaaaagaggaaataatagatatacaagaaaag
ataaagactattttaaatgaaaataaaggtaagaatacttgcttttttgcaaacaatgat
gaaatattaaaagttcttatagaatgtctatttgatttaaaaataaacattggaatagat
gtgggtatatttggattcgctgatgaaaaatgggctcgtttaattggaccaggaattact
tcaatagatcagaatccatataaaataggagaaagagcagccacattactttttgaaagg
atagatggtagtagaacaacagaatttgttctagaagaaattcctgctacaattcaccta
cattattctacaaatattataaaaaaatag
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