Clostridium gelidum: psyc5s11_51950
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Entry
psyc5s11_51950 CDS
T08447
Name
(GenBank) beta-lactamase
KO
K05364
penicillin-binding protein A
Organism
cgel
Clostridium gelidum
Pathway
cgel00550
Peptidoglycan biosynthesis
cgel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
psyc5s11_51950
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cgel01011
]
psyc5s11_51950
Peptidoglycan biosynthesis and degradation proteins [BR:
cgel01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
psyc5s11_51950
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GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
PBP_dimer
DUF5412
Tipalpha
YdfZ
Motif
Other DBs
NCBI-ProteinID:
BCZ49128
LinkDB
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Position
complement(5655465..5656943)
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AA seq
492 aa
AA seq
DB search
MKNVSNSIKQVMVVFLFCFVALISYIAYFQVFSAPNIAEEQGNQRLWAKRNEVLRGTIYD
RNKNALTTSAKVNDLTQKRTYVNGDLYVHALGYVDPRYGLTGLEANYDSELTTYNKITNN
ILNLTKDFSKEKLKEMFNSRKEDEVKIGNGVITTLDPTLQKIAYDALENNKGAVVALNPK
TGEVLAMVSRPTYNPNDLESSMKAANAGKADNSPLINRATSGLYPPGSTFKTVTLSSSLD
NMPGVTSRTFDDTGKIVFNEKQSLSNDNGEVNGAINLKEAFRLSSNFVFGTLAMELGNDK
LKTTAEKYGFNSTIDSDGFKITQSQFPKLTKAEVGSIAQSGIGQSSILATPMQMALISST
IANNGKMMEPRLVNTVIDKDGNTVKTIDSKVYKQVISTANAAIIKDYMKNLVDSRVDSSW
GFFQGIEAAGKTGTADYNLASGESAKPHSWFIGFAPANNPQIAVAVIVENGGYGASAAAP
IAGKVMKSALNK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaatgtttctaatagtataaaacaagttatggtagtttttttattttgctttgta
gctcttatctcttatattgcatattttcaagttttttcagcacctaatatagcagaagag
caagggaatcaaagactatgggcaaaaagaaatgaagttttaagaggaactatatatgac
agaaataaaaatgcactgacaacaagtgcaaaagtaaatgatcttacacaaaaaagaact
tatgttaatggcgatttatatgttcatgctttaggttatgtagatccaaggtatggatta
acaggattagaagcaaattatgatagtgaattgacaacttataataaaattacaaataac
atcttaaatttaactaaagattttagtaaagaaaaattaaaagagatgtttaatagcaga
aaagaagatgaggttaaaatcggtaatggggtcataactacactagatcctacacttcaa
aagatagcttatgatgctcttgaaaataataaaggggctgtagttgcattaaatcctaaa
acaggagaagtacttgcgatggtttcaagaccaacatacaatccaaatgatttagaaagt
tcaatgaaggcagcaaatgcaggtaaagcagacaatagcccacttataaatagagcaaca
tctggactttatccaccaggatcaacttttaaaactgtcactcttagcagttctttagac
aatatgccaggtgttacaagcaggacatttgatgatactgggaaaatagtatttaatgaa
aaacaatctctaagcaatgataatggagaagttaatggagctataaatttaaaagaagca
tttagattatcaagtaattttgtatttggtacactagcgatggagcttggaaatgataaa
ttaaaaactaccgctgaaaaatatggttttaatagtaccattgattcagatggatttaag
ataactcaaagtcaatttccaaagttaactaaagctgaagttggtagtatagcacaatct
ggtattgggcaaagtagcattttagcaacaccaatgcaaatggctttaatttcaagtact
atagccaataatgggaagatgatggagccaagacttgttaacacagtaatagataaggat
ggaaatacagtaaaaactatagattcaaaagtatataaacaagtcattagtacagctaat
gcagctattataaaagattatatgaaaaatctagttgattctagagttgattcttcttgg
ggtttttttcaaggaattgaggcagctggtaaaacaggtacagcagattataatcttgcg
agtggtgaaagtgctaaacctcattcatggtttattggatttgcaccagcaaacaatcca
caaattgcagtagcagttatagtggaaaatggaggatatggagcaagtgcagcagcacca
atagcaggaaaagttatgaagtctgcactaaataagtaa
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