Clostridium gelidum: psyc5s11_51980
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Entry
psyc5s11_51980 CDS
T08447
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
cgel
Clostridium gelidum
Pathway
cgel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
psyc5s11_51980 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgel03400
]
psyc5s11_51980 (uvrA)
DNA repair and recombination proteins [BR:
cgel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
psyc5s11_51980 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
psyc5s11_51980 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
RsgA_GTPase
AAA_15
AAA_16
nSTAND1
AAA_22
ATPase
CHP02642
DnaJ_CXXCXGXG
Viral_helicase1
cobW
DUF4350
NMDAR2_C
Motif
Other DBs
NCBI-ProteinID:
BCZ49131
UniProt:
A0ABM7TB12
LinkDB
All DBs
Position
complement(5659050..5661878)
Genome browser
AA seq
942 aa
AA seq
DB search
MNDKIIIKGAKVNNLKNVSLEIPRDKLVVFTGLSGSGKSSLAFDTLYAEGQRRYMESLSS
YARQFLGQMDKPNVEYIAGLSPAISIDQKSTNKNPRSTVGTITEIYDYLRLLYAKVGTPH
CPKCGKEITKQSVDQIVDKIMNYGDKTKLQILAPMIKGRKGSHEKLLENIRKNGFIRARI
DGEIYDLTEEEIKLDKNKKHNIEAVIDRIVIKEGIEGRLTESIESSLKIGEGLVIASVID
GHDTLFSENFACAECGISIGELAPRLFSFNAPFGKCDHCDGLGTLIEIDEKLVIPNRELS
IMDGAIASWGNGRLKEDSWTYAILQALGREYGLELNTPIKDLDKKHIELLLYGTQGKKLK
VEYTKDGVRAVYNYAFDGEINSLNRRYRETNSDLIKSGIEQYMSDDFCPKCKGARLSDEA
LSVTVGEKNIFEFSSMPIREELDFISGIEFSEKNRIISEQIIKEIKNRLQFLLDVGLDYL
SLSRKSGTLSGGESQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNDRLIQTLKNLRDVG
NTVIVVEHDEDTIREADYIVDIGPGAGEHGGEVVVTGTLDDVKACEKSITGQYLTGKKLI
EVPKIRKKGNGQIIKVVGAKENNLKNINISIPLGTLTAVTGVSGSGKSTLVNEILYKGLN
KLVNKSKKPVGKHKEIIGYENIDKIIDIDQSPIGRTPRSNPATYTGTFDIIRELFSQTQE
AKMRGYKQGRFSFNVKGGRCEACSGDGIIKIEMQFLSDVYVPCEVCKGKRYNRETLEVKY
KGKNIDDILNMTVEEAVKFFENIPRIENKLRTLNDVGLGYIRLGQPSTQLSGGEAQRIKL
ASELSKRSTGKTLYILDEPTTGLHVDDVSRLIEILQRLVESGNTVVVIEHNLDMIKCADY
LIDLGPEGGDKGGTLIKAGTPEELCKVEASYTGKYLKSVLNN
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaatgataagataataattaagggtgctaaggttaataatttaaagaatgttagtttg
gagataccaagagataagctagttgtgtttacaggattatcaggctcaggtaagtcgtcg
ttagcttttgatacgttatatgcagaaggacaaagaagatatatggaatctttatcctct
tatgcaagacaatttttaggacaaatggataagccaaatgttgagtacatagcagggcta
tcaccagccatatcaatagaccaaaagagtacaaacaaaaatccaagatcgacagttgga
acaataacagaaatttatgattatttaagattactatatgcaaaagttggaactccacat
tgtccaaagtgtggaaaggaaattactaagcagtctgttgatcaaattgttgataagatt
atgaactatggggataaaactaaacttcaaatattagcgcccatgattaaaggcagaaaa
ggaagtcatgaaaagttattagagaatataagaaaaaatggatttataagagctagaatt
gatggggaaatttatgatttaactgaagaagaaataaaattagataaaaacaaaaaacat
aatattgaagctgttatagatagaattgttataaaagaaggaatagaaggaagacttaca
gagtctatagaatcatcgctaaaaataggagaaggtctagtaatagccagtgttattgat
ggacatgacactttatttagtgaaaattttgcttgtgcagaatgtggaataagtattggt
gaattagcacctagattattttcatttaatgctccatttggtaagtgtgatcattgtgat
ggtcttggaactttaattgaaatagatgagaaattagtaattccaaatagagaattaagt
attatggatggtgctatagctagttgggggaatggaagacttaaagaagattcatggact
tatgctatacttcaagcattaggtagagaatatggattagagttaaatacgccaataaaa
gatttagataagaaacatattgagttacttttatatggaacacaaggaaagaaacttaag
gttgaatatacaaaagatggtgttagagcagtatataattacgcctttgatggagaaata
aattctttgaatagaagatatagagaaactaattcagatttgataaaaagtggaatagag
caatatatgagtgatgacttttgtcctaagtgtaaaggtgcaagattgagtgatgaagca
ctttcagttactgttggcgaaaaaaatatatttgaattttcaagtatgccaataagagaa
gaattagattttataagtggaatagaattttcagaaaagaatagaattattagtgaacaa
attataaaagagattaaaaacagattacagtttttattggatgtaggacttgattatttg
agtttatcaagaaaatcaggaactttatcaggaggagaatctcaaagaataaggcttgca
actcaaataggttcatcacttatgggtgttttgtatattttagatgaacctagtattggt
ttgcatcaaagagataatgatagactgatacaaactttaaagaatttaagagatgtggga
aatacagtaatagttgtagaacatgatgaagatactattagagaagcagattatattgtt
gatattggacctggtgcaggagagcatgggggtgaagtggtagttactggtactcttgat
gatgttaaagcgtgtgaaaaatcaataacaggacaatacttaacaggaaaaaaattaatt
gaagtgccaaaaataagaaaaaagggtaatggacaaattataaaggttgtaggagcaaaa
gaaaataacttaaagaacataaatatatcaattccacttggaacattaacagcagttact
ggagtttcaggttctggaaaaagtactttggtaaatgaaatactttataaaggcttgaat
aagctagtgaacaagagtaaaaagcctgtgggaaagcataaagaaataattgggtatgag
aatatagataaaataatagatatagatcaaagcccaataggaagaacgccacgttctaat
cctgctacttatacagggacatttgatataattagagagcttttttcgcaaactcaagaa
gctaaaatgagaggttataagcaaggacgatttagttttaatgttaagggcggaagatgt
gaagcctgctctggagatggaattataaaaatagaaatgcaatttttatctgatgtatat
gtaccttgtgaggtatgtaaaggaaaaagatacaatagagaaaccttagaagttaagtat
aaagggaaaaatatagatgatatattaaacatgacagttgaagaagcagtgaaattcttt
gaaaatattcctaggatagaaaacaagttgagaacattaaatgatgttggcctaggatat
attagattaggtcagccatcaactcaattatcaggtggagaggctcaaagaataaaatta
gcatctgaattatcaaaaagaagtacaggtaaaacactgtacatattagatgaaccaaca
acaggattacatgtagatgatgttagcagattaatagaaatacttcaaaggctagtagag
tcaggaaacacggtggttgtaattgaacataatctagatatgataaaatgtgcagattat
ttaattgatttgggaccagaaggtggagataagggaggaactcttattaaagcaggaaca
cctgaggaactatgcaaagttgaagcatcatatacaggaaaatatttaaaaagtgttttg
aataattaa
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