Campylobacter geochelonis: CGEO_0293
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Entry
CGEO_0293 CDS
T06802
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cgeo
Campylobacter geochelonis
Pathway
cgeo00300
Lysine biosynthesis
cgeo00470
D-Amino acid metabolism
cgeo01100
Metabolic pathways
cgeo01110
Biosynthesis of secondary metabolites
cgeo01120
Microbial metabolism in diverse environments
cgeo01230
Biosynthesis of amino acids
Module
cgeo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cgeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CGEO_0293 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CGEO_0293 (lysA)
Enzymes [BR:
cgeo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CGEO_0293 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
TBK1_CCD1
HpcH_HpaI
Motif
Other DBs
NCBI-ProteinID:
QKF70626
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All DBs
Position
300831..302036
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AA seq
401 aa
AA seq
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MDYKQLAKTYETPLYIYDFNQIKKRYLELKNSFAGRKSLVCYAVKANSNLSLLKLLANLG
SGFDCVSFNEVRRAILAGADRYKIIYSGVGKQDSEIKDAINANILMINVESSAELDRIEE
IAKSLDKIARISIRVNPNIDPKTHPYISTGLNENKFGVNINEAKKMYIKAKNSQFLNPIG
IHFHIGSQLIDIMPVHEAAQIVSNLMRELKALEIDIKFFDIGGGVGIRYKDEKNVDLYEY
AQGILSALKGQDETIVCEPGRFIVGESGVLLTKVLYEKVNNDKRFVVVDGAMNDLLRPSL
YGAYHEIEALADGLNLSKCDIVGPICESGDFLGKDRDMPELKSGDLLVVKCAGAYGFGMA
SNYNSRCKAAEVAIEDGKARLIRKREKFEDLVANEIEFIGE
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggactataaacagcttgccaaaacttacgaaacaccactttacatttatgattttaat
cagataaaaaagagatatctagagcttaaaaactcatttgcaggaagaaaatctctagtt
tgttacgctgtaaaagcaaactcaaatttaagcttgttaaagcttttagcaaatttaggt
tctggatttgactgcgttagctttaacgaagttagaagagcgattttagcaggagctgat
agatataagataatatattcaggagttggaaagcaagatagtgagataaaagatgctata
aacgcaaacattttgatgataaatgtcgaaagtagcgccgaacttgatagaatcgaagaa
atcgcaaaaagcctagataaaatagcaagaatcagcataagagtaaatccaaatatcgat
ccaaaaacccatccatacatctcaactggacttaacgaaaacaaatttggtgtgaatata
aatgaagcaaaaaagatgtatatcaaagcaaaaaatagtcagtttttaaatccgattggc
atacattttcacataggaagccagcttattgatatcatgccagttcatgaagcagcgcaa
atcgtgtcaaatttaatgagagaattaaaagcgttagaaattgatattaaattttttgat
atcggcggtggcgttggaatacgttataaagatgaaaaaaatgtcgatttatacgagtat
gcacaaggaattttatcagcgcttaaaggtcaagatgagactatcgtgtgtgagccaggt
cgttttatcgtaggcgaaagtggcgtgcttttgacaaaagttttatatgaaaaagttaat
aacgataaaagatttgtcgtagtagatggcgcgatgaacgatcttttgcgcccgagtcta
tatggcgcttatcatgagattgaagctttggcggatggcttgaatttaagcaaatgcgat
atcgttggcccgatttgtgaaagtggcgattttttaggaaaagatagagatatgccagag
cttaaaagtggcgatttgcttgttgtaaaatgcgctggagcttatggttttggcatggca
agcaactacaactcaaggtgtaaagccgcagaagttgctatagaagatggcaaggctagg
cttattagaaaacgagaaaaatttgaagatttggtcgcaaacgaaatcgaatttatagga
gaataa
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