Campylobacter geochelonis: CGEO_0639
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Entry
CGEO_0639 CDS
T06802
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cgeo
Campylobacter geochelonis
Pathway
cgeo03420
Nucleotide excision repair
cgeo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CGEO_0639
03430 Mismatch repair
CGEO_0639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgeo03400
]
CGEO_0639
Enzymes [BR:
cgeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGEO_0639
DNA repair and recombination proteins [BR:
cgeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGEO_0639
MMR (mismatch excision repair)
Other MMR factors
CGEO_0639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
CarD_TRCF_RID
AAA_11
PigL_N
Motif
Other DBs
NCBI-ProteinID:
QKF70960
LinkDB
All DBs
Position
684187..686250
Genome browser
AA seq
687 aa
AA seq
DB search
MENILKGLNDEQIKAVEHIDGPMLILAGAGSGKTKTITSRLAYLIANGIAPSSTLTLTFT
NKAANEMRTRALSMISSKVSTPPLLCTFHKFGLLFLKFYISELNRKNNFVIIDTDDKKKI
IKGFESDISTSVLSNEISKFKNSLVSVEEAVKTAQMFGGEVSKQASGYYTKVAEIYKKYE
NILKNDNLVDFDDLLALPYKILDANPTLCDEISNRYQFIMVDEYQDTNDLQFKLLEKLCC
AHQNLCVVGDDDQSIYGWRGAKIENILNFKDQFNSVKLIKLENNYRSSEHILNAANNLID
YNRNRLGKKLVSTKEKGEEIELFESDDENYEANKIANEITKLISSGVNPKEIAVLYRINA
LSRALEDGLAKARIPYKMVGGMKFYERAEIKDIISYLRLITNNSDDFSLRRIINRPKRGL
GKVGLAKIEKLAFDSKASLFDTISNLSEADVSKKVLKELKELVKSVKSLAKVENFSLMID
KLEDNFGLKAYYKSLNDGSDRVANIDEFCAMLKDEIVNNANFELEEFLNELSLQSEQDAI
SDEAISIMSVHASKGLEFEHLFVIGLEEGFFPLIGDGSDIEEERRLAYVAITRAKSHLTL
SRSNSRFYKGKRERLNKSRFLSEAGLCEGSLVFEKSDDLKKGDLVKHKLFGMGRIISITK
IKNESKLKINFGGINREIMSSFVEKVV
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatatactaaaaggtttaaacgacgaacaaatcaaagcagtagagcatatagat
ggtccgatgttgatacttgctggtgctggaagtggcaaaaccaaaaccataacttcacgc
cttgcttatcttatagcaaacggcatagcaccttcttccacgctcactcttacatttacc
aacaaagccgcaaacgaaatgcgaactagggcgctttctatgatatcgagcaaggtttca
accccgcctttactttgcacatttcacaaatttggacttttgtttttgaaattttacatt
tctgagctaaatagaaaaaacaactttgtcatcattgacacagatgataaaaaaaagatt
ataaaaggctttgagagcgatatttctacatctgttttatcaaacgagatatctaaattt
aaaaactcgctagtaagcgttgaagaagcggttaaaactgctcagatgtttggcggggaa
gttagcaaacaagcaagcggatactacacaaaagtggctgaaatttataaaaaatatgaa
aatatactaaaaaatgataatttggtggattttgatgatttgttagctttaccttataaa
attttagatgcaaatccgactttatgtgatgaaatttcaaacagatatcagtttatcatg
gtcgatgagtatcaagatacgaacgatttgcagtttaaactgcttgaaaaactctgctgc
gctcaccaaaatttatgtgtagttggcgatgatgatcaaagtatttatggttggcgtggt
gcgaagatagaaaatatactaaatttcaaagatcagtttaatagcgtaaaacttataaag
ctagaaaacaactaccgctcaagtgagcatattttaaatgctgcaaacaacctaatagac
tataaccgaaaccgacttggcaaaaaattagtaagcacaaaagaaaagggcgaagaaatc
gagctttttgaaagcgatgatgaaaactacgaagcaaacaaaatcgcaaacgagataaca
aaactaatctcaagtggcgttaatccaaaagaaatagccgtgctttaccgtataaacgca
ctatctcgcgcacttgaagatggtttagcaaaggctagaattccttataagatggttgga
ggaatgaagttttatgaaagagcagagataaaagatatcataagttatctaagattgatt
acaaacaacagcgatgatttctcgcttcgccgcattataaaccgaccaaaaagaggactt
ggtaaggttggacttgcaaaaatcgaaaagctagcctttgatagcaaagcttcacttttt
gatacgatttcaaatttaagcgaagcagatgttagtaaaaaggttttaaaagagttaaaa
gagctggttaaaagcgtaaaatcactagcaaaagtagaaaatttctctttgatgatagat
aaacttgaggataattttggactaaaggcttactataaaagtttaaatgatggaagcgat
agagttgcaaacatcgacgagttttgcgccatgcttaaagatgagattgtaaataacgca
aatttcgagcttgaggagtttttaaacgagcttagtcttcaaagcgaacaagatgcgata
agcgatgaagccatttctataatgagcgttcatgcaagcaaaggactcgagtttgaacat
ctttttgttatcggacttgaggagggatttttcccgcttataggcgatggaagcgatata
gaagaggagagaagacttgcttatgtggctataactagagctaaaagtcatctaacttta
agccgttcaaacagtagattttataaaggcaaaagagaaaggctaaataaaagtagattt
ttaagtgaggctgggctttgtgaaggttctttggtttttgaaaagagtgatgatcttaaa
aaaggggatttggttaagcataaactcttcggtatgggaagaataatttcaataactaaa
atcaaaaatgaatcaaaacttaagataaattttggcggtattaaccgtgagattatgtca
agttttgttgagaaagtcgtatga
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