Campylobacter geochelonis: CGEO_0640
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Entry
CGEO_0640 CDS
T06802
Symbol
truB
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cgeo
Campylobacter geochelonis
Brite
KEGG Orthology (KO) [BR:
cgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgeo03016
]
CGEO_0640 (truB)
Enzymes [BR:
cgeo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CGEO_0640 (truB)
Transfer RNA biogenesis [BR:
cgeo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CGEO_0640 (truB)
Prokaryotic type
CGEO_0640 (truB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QKF70961
LinkDB
All DBs
Position
686247..687065
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AA seq
272 aa
AA seq
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MNRLFVANKPMGVGSNHFLSKLKRKYGVKKAGFSGTLDPFASGCLIVAFGEFTRFFRFLK
KTPKIYQATIWIGASSPSGDNENIKSVEKLLAFHSSAIELIAKSLVGELEYIPPKFSAKR
VDGKRAYELARKGDEFELKKSVMSVYSCEIISYMHPFLSLRLSVSEGAYIRSYAELFAKK
LGVNATLSALKRVSEGEFKFEDEKALNPLEYLNLAPNLYLGNFDDVRLGKKLNLVDFKNQ
NDGEYLLNLDDLHSIIKIENGNVSYLLNRIKI
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcctttttgtcgcaaacaagccaatgggagttggctcaaatcactttttaagc
aagcttaaaagaaaatatggtgttaaaaaagctggtttttcaggcacacttgatccgttt
gcaagtgggtgcttgatagtagcttttggcgagtttacccgcttttttcgctttcttaaa
aaaactccaaaaatctatcaagccactatctggataggcgcaagtagcccaagtggcgat
aatgaaaatataaaaagtgttgaaaaacttcttgcatttcattcaagtgcgattgagctg
atagctaagagtttggttggcgagcttgagtatatcccacctaaattcagtgctaaaaga
gttgatggtaaaagagcgtatgaactagctagaaaaggcgatgaatttgagcttaaaaaa
agcgttatgagcgtttatagctgtgagataatctcatatatgcatccgtttttaagctta
agactaagcgttagtgagggtgcttatatacgttcatatgctgaactttttgctaaaaaa
ttaggcgttaatgcgactttaagcgcgttaaaaagagtaagtgagggtgagtttaaattt
gaagatgaaaaggcgttaaatccgcttgagtatctaaatttagctccaaatttatatctt
ggaaattttgatgatgtaagacttggcaaaaagctaaatttggttgattttaaaaatcaa
aatgatggcgaatacttactaaatttagacgatttgcactctataatcaagatagaaaat
ggcaatgttagctatcttttaaataggataaaaatttga
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