Campylobacter geochelonis: CGEO_0778
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Entry
CGEO_0778 CDS
T06802
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
cgeo
Campylobacter geochelonis
Brite
KEGG Orthology (KO) [BR:
cgeo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CGEO_0778 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgeo03021
]
CGEO_0778 (rpoD)
Transcription machinery [BR:
cgeo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CGEO_0778 (rpoD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
MCR_beta_N
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QKF71098
LinkDB
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Position
complement(836361..838241)
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AA seq
626 aa
AA seq
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MSTKKPTTKEFFSQVEELFKENQKGYVTHERLIKLFDKAPTATNVKKIESLVDKYNINLI
SSAEIAKLRNIEDARKKEADAKKFIEDNQDEEFDVTNDNDLLEWSRSDSPVRMYLREMGQ
IPLLTKEEEVEISKKIELGEDIIIDAFCSVPYLIDFILDYKEPLINRERRVKELFKSFDD
EGEEDEIDEEEDEIEEYEEGEEGEAKPAPKKNDKRTLKVIESFKTLEKAKKDWMKYASKN
KDEIVADGEDALFARLSLAFKKKILKEKLMDLGPTSKLINEIVKSMETALKSDSEFDKEL
KRLEYKLPLFSPELKKNHAAILKDITKLTKENIIERVPEATMVSTYMDIKKLFQTKEASK
DSFDLEPKKLKEILEQIKRGKNISDDAKGRMARSNLRLVVSIAKRFTNRGLPFLDLIQEG
NIGLMKAVDKFEYKKGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINRISKINR
KYLQEEGKEPDIHVIAEEVGLSVDKIKQVIKITKEPISLEAPIGNEDDGKFGDFVEDKSS
LSPMDHILKNDLKEQIDDVLDQLNEREKAVIRMRFGLLDDESDRTLEEIGKELNVTRERV
RQIESSAIKKLKHPKVGRKLKNYIEG
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccaaaaaacctaccactaaagaatttttttctcaagtcgaagagctttttaaa
gagaaccaaaaaggctatgtaacacacgaaaggcttataaagctttttgataaagcacca
acggctacaaatgtcaaaaaaatcgagtctttagtagataaatacaacataaatttaatc
tcttcagccgagatagcaaaactaagaaacatagaagatgctagaaaaaaagaggctgat
gctaagaaatttatagaagataatcaagatgaagagtttgatgtaacaaatgataatgat
ttgttagagtggagtcgctctgatagccctgttagaatgtatcttcgcgaaatgggacaa
atcccacttctaacaaaagaagaagaggttgaaatcagcaaaaaaatcgagcttggagag
gatatcatcatcgatgctttttgttctgttccatacttgatagactttatacttgattat
aaagagcctttaatcaaccgcgagcgtcgcgtcaaagagctttttaaaagctttgatgat
gagggcgaagaagatgaaatcgatgaagaagaagatgaaatcgaagagtatgaagagggc
gaggaaggcgaagcaaaaccagcacctaagaaaaacgataaaagaacgctaaaagtcatc
gaaagctttaaaacattagaaaaagctaaaaaagactggatgaaatacgctagtaaaaac
aaagatgagattgtagctgatggcgaggacgcactttttgcaagacttagccttgctttt
aaaaagaaaattttaaaagaaaaacttatggacttaggaccaacaagcaagcttataaat
gaaatcgttaagtcgatggaaactgccttaaaaagcgatagcgagtttgataaagagctt
aaaagacttgagtataaactaccactttttagcccagaacttaagaaaaaccatgcagct
atcttaaaagatataactaaacttactaaagaaaatatcatcgaaagagttcctgaagct
acgatggtatcgacttatatggatataaaaaagctttttcaaacaaaagaagcgagcaaa
gatagctttgatttggagccaaaaaaactaaaagagattttagagcaaatcaaacgcgga
aaaaacatctccgatgatgccaaaggcagaatggctcgctcaaacttacggcttgttgta
agtatagcaaaacgctttactaaccgtgggctaccgtttttagatcttatacaagaagga
aacatcggtcttatgaaagcggttgataaattcgagtataaaaagggatataaattctca
acttacgccacgtggtggataagacaagccataagcagagcaatcgcagatcaagcaaga
acgataagaatcccaattcacatgattgaaacaataaatcgtatcagtaaaatcaaccga
aaataccttcaagaagagggaaaagagcctgatatccacgttatcgcagaagaagtcgga
ctaagcgttgataagataaaacaagttatcaaaatcacaaaagagccaatcagccttgaa
gcgccaatcggcaatgaagatgatggtaaatttggagactttgttgaagataaaagctca
ctttcaccgatggatcatatacttaaaaacgacttaaaagagcagattgatgatgtgtta
gatcagctaaatgagcgagaaaaagcggttattagaatgcgttttgggcttcttgatgat
gagagcgatagaactcttgaagagataggaaaagagctaaatgtaactagagagcgcgta
agacaaatcgaaagctcagcgataaaaaaactaaaacacccaaaagtcggtagaaaactt
aaaaactacatcgaaggctaa
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