Campylobacter geochelonis: CGEO_1008
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Entry
CGEO_1008 CDS
T06802
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cgeo
Campylobacter geochelonis
Pathway
cgeo00470
D-Amino acid metabolism
cgeo00550
Peptidoglycan biosynthesis
cgeo01100
Metabolic pathways
cgeo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cgeo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CGEO_1008 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CGEO_1008 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CGEO_1008 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cgeo01011
]
CGEO_1008 (ddlA)
Enzymes [BR:
cgeo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CGEO_1008 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
cgeo01011
]
Precursor biosynthesis
Amino acid ligase
CGEO_1008 (ddlA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
ATP-grasp_4
Pil1
Motif
Other DBs
NCBI-ProteinID:
QKF71322
LinkDB
All DBs
Position
complement(1104546..1105571)
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AA seq
341 aa
AA seq
DB search
MQLGVIFGGQSYEHEISIVSAITLKGQLRQNLVFVFCDKDRNFYQIDEKNMKAVYFSSGE
YKKSKQLNLKNGGFYAEGMFSKTVIKVDVFINLIHGCDGEDGKISALFDFFEVAYIGPRI
EASVMSYNKELTKFLCAQAGVKTLDYEVLKRGKKLNLALPVILKPLRLGSSIGISIVKKD
SELEYGLDNAYEYDDVILAEPFIENVKEYNLAGCKVGEEFIYSIVEEPKKDKILDFEQKY
MSFSGNSTVNEANLDQNLKTRLKEAFAKIYSCGFDGAVIRCDFFVHDNEIYLNEINPNPG
SLAYYLFNGFEDMINLLAKNLPNRVRIPVSYKYIQSISAHK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgcaactaggtgtaatttttggtggtcaaagctatgaacatgagattagtatagtttca
gctatcacgttaaaagggcagttaagacaaaatttggtctttgttttttgtgataaggat
agaaacttttatcaaatcgatgaaaaaaatatgaaagcagtatattttagctctggcgag
tataaaaaatcaaagcagttaaatctaaaaaatggcggattttacgccgaggggatgttt
tcaaaaactgttataaaagttgatgtttttataaatttaattcatggatgtgatggagaa
gatggtaaaatctcagctctttttgacttttttgaagtcgcatacataggcccacgaatc
gaagcttcggttatgagttataacaaagagctaactaaattcttatgcgctcaagccgga
gttaaaactcttgattatgaagttttaaaaaggggtaaaaagctaaatttagccttacca
gttatcttaaaaccgctcaggcttggaagcagcatcggtataagcatagtaaaaaaagat
agtgagctagagtatggtttggataatgcttatgagtatgatgatgtgattttagctgaa
ccatttatagaaaatgtaaaagagtataacctagcaggatgtaaagtaggtgaagagttt
atctactcgatagtagaagagccaaaaaaagataagattttagactttgagcaaaagtat
atgagcttttctggaaattccactgtaaatgaggcaaatttagaccaaaatttaaaaaca
aggctaaaagaggcgtttgctaagatttattcttgtgggtttgatggagctgttataagg
tgtgattttttcgtgcatgataatgaaatttatctaaatgagataaatccaaacccagga
agcctagcttactacctttttaacggttttgaggatatgataaatttactagctaaaaac
ttgccaaatagagtaagaattccagttagctacaaatatattcagtcaatctctgcacat
aagtag
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