Campylobacter geochelonis: CGEO_1060
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Entry
CGEO_1060 CDS
T06802
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cgeo
Campylobacter geochelonis
Pathway
cgeo03420
Nucleotide excision repair
cgeo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CGEO_1060 (rep)
03430 Mismatch repair
CGEO_1060 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgeo03400
]
CGEO_1060 (rep)
Enzymes [BR:
cgeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGEO_1060 (rep)
DNA repair and recombination proteins [BR:
cgeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGEO_1060 (rep)
MMR (mismatch excision repair)
Other MMR factors
CGEO_1060 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
DEAD
Viral_helicase1
AAA_12
ResIII
AAA_30
DUF1758
Motif
Other DBs
NCBI-ProteinID:
QKF71371
LinkDB
All DBs
Position
complement(1162394..1164433)
Genome browser
AA seq
679 aa
AA seq
DB search
MPLSKLNTEQYLAATAPLGRNLIIASAGTGKTSTIVARIAHLLNSGTSPKKILLLTFTNK
AASEMVSRLERYFDKKITTQITSGTFHAVSYALLKKLEKNVILKQPNDLKTLLKSLVERR
KFNHISEVKPYGGVYLYDVYSLFQNKEGGGKKDSDFYSWFCKNYEEQAVYAEIYEDVLKE
FEEEKAKFGYVDFNDLLLNMKKELVKGAPLSFDEILVDEYQDTNSLQGSLIDAFNTKSLF
CVGDFDQSIYAFNGANIEIIGSFKDRYQDAKIYALNINYRSSSSILALANKVISNNPRLY
PKNLIVSRDGSFKAPKLLVFDELFAQYVNISNLIKTSNVKKEEIAIIFRNNSSADGLEAS
LREQGIAAKRKGGMSFFESKEIKALINLIGIFINPKDIMAFMQICEYAKGVGSAASKEIY
DALSALGHGDLVRGFLAPDFSVKVFESKKKNYQLGLFDEFDNIGDVSRFSNLGFNDEFLA
HPVLKYQKLSSDGATMLYEIYKFLIKITHMTNLTSIIKSSISSKAYDMIADTLATKRATL
KNGKVDLAIKDEAKNRIYQKLEILIQMSRNYKDINSFYNFITLGANELSEGEGVNLLSIH
ASKGLEFKLVFVVDLAQNRFPNLKLMGMGGSLEEERRLFYVAVTRAKDELILSYAKYDKI
RKVSYQPSQFLIEAGMIKG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgccactatcaaaactaaacaccgaacaatacctcgcagcaaccgctccactggggcga
aaccttatcatagcaagtgcaggaactggaaagacttcaactatagtcgcgcgcatagca
caccttttaaactcaggcacaagccctaaaaaaatcttgcttttaacctttacaaacaag
gcagcaagtgagatggtaagcaggcttgagcggtattttgataaaaaaatcaccacgcaa
atcacatctggaacttttcacgccgtatcttatgctctacttaaaaagctagaaaaaaat
gttattttaaaacagccaaatgatttaaaaacgcttttaaaatccttggttgaaaggcgt
aaatttaaccatattagcgaggttaaaccatatggcggagtctatttatacgatgtttac
tcgctttttcaaaacaaagagggtgggggcaaaaaagatagcgatttttatagctggttt
tgtaaaaactacgaagaacaagcagtttatgctgaaatttatgaagatgttttaaaggaa
tttgaagaagagaaggcaaaatttggctatgtggattttaatgatttgcttttaaatatg
aaaaaagagcttgtaaagggcgctccacttagttttgatgaaattttagtcgatgagtat
caagatacaaattcgcttcaaggaagcctaatcgatgcgtttaatacaaaaagccttttt
tgtgttggtgactttgatcaaagtatttatgcgtttaatggcgcaaatatcgagataatc
ggcagttttaaagacagatatcaagatgctaaaatttacgcgcttaacataaattaccgc
tcaagcagtagtattcttgcgcttgcaaacaaggtcatatcaaacaacccacgcctctat
ccaaaaaacttgattgtaagtcgcgatggaagctttaaggcaccaaaattgcttgtgttt
gatgaactttttgctcagtatgtaaatatatcaaatttaataaaaacctcaaatgtcaaa
aaagaggaaatcgccataatctttcgcaacaactcaagcgctgatggcttagaagcaagc
ttaagagagcaaggaatcgcagcaaaaagaaaaggtgggatgagtttttttgaaagtaaa
gaaatcaaagcgcttataaatttaatcggaatttttataaacccaaaagatataatggca
tttatgcaaatttgcgagtatgcaaaaggcgttggaagtgcggcgagtaaggagatttac
gatgctttaagtgcgcttgggcatggggatttggttaggggatttttagctcctgatttt
agcgtaaaagtctttgaaagcaagaagaaaaactatcagcttgggctttttgatgagttt
gataacatcggcgatgtttctaggttttcaaatcttggatttaatgatgagtttttagct
catccagttctaaaatatcaaaagctaagtagtgatggtgcgactatgctgtatgaaata
tataaatttcttataaagataacgcatatgacaaatttaacttcgattatcaaatctagc
attagctcaaaagcatatgatatgatagccgatactcttgcgacaaaaagggcgacgcta
aaaaatggcaaggtggatttggctataaaagatgaggctaaaaacagaatttatcaaaag
ctagaaattttaatccagatgtcaagaaactataaagatataaatagtttttataacttt
ataaccttaggagcaaacgagcttagcgaaggcgaaggtgtgaatttactaagtattcac
gcaagcaaggggcttgagtttaagctagtttttgtagtagacttagcgcaaaaccgcttt
ccaaatctaaaactaatgggtatgggcggaagcttagaagaggagcgacggctcttttat
gtcgcagttacaagggcaaaagatgagttgattttaagctatgcaaagtatgataaaatc
agaaaagtatcgtatcagccaagccagtttttaatcgaagctggtatgataaaaggatag
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