Campylobacter geochelonis: CGEO_1467
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Entry
CGEO_1467 CDS
T06802
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
cgeo
Campylobacter geochelonis
Pathway
cgeo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CGEO_1467 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgeo03400
]
CGEO_1467 (uvrB)
DNA repair and recombination proteins [BR:
cgeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGEO_1467 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CGEO_1467 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
AAA_30
Focal_AT
Kinesin
SWI2_SNF2
AAA_22
SLFN-g3_helicase
AAA_16
Microtub_bd
PIF1
DUF87
AAA
Motif
Other DBs
NCBI-ProteinID:
QKF71753
LinkDB
All DBs
Position
1643224..1645200
Genome browser
AA seq
658 aa
AA seq
DB search
MKNFEISSKFSPSDDQKKAIEGIVNSVKSGSHYQTLLGVTGSGKTFTMANVIKELNMPTL
IMTHNKSLAAQLYSEFKGFFPRNHVEYFISYYDYYQPEAYIPRQDLFIEKDSSINDELER
LRLSATASLLSFDDVITIASVSANYGLGNPAEYQGMVLILEVGANLSSKALLRKLVDMGY
KRNDSFFDRGDFRVNGDVIDIYPAYFSDEAIRLEFFGDELEEMYHFDVLENKRGSSVNKF
ILYATSQFIVGEDRLKIAIKEIEVELEKRLKFFNENDKLVEAQRLKQRVEFDLEMLNATG
MCKGVENYARHLTGQAPGQTPYSLFDYYEVKGVDYLVIVDESHVSLPQFRGMYAGDRSRK
ETLVEYGFRLPSALDNRPLMFDEFISKRGFFLFVSATPNELELNLSNGHIYEQILRPTGL
LDPEITIKDSDNQVELLYDMAKEVIARNERVLVTVLTKKMAEELSRYYLELGIKVKYMHS
DIDAVERNELIRGLRFGDFDMLIGINLLREGLDLPEVSLIAIMDADKEGFLRSRTSLIQT
MGRAARNLNGKVVMFAKKITNSMKEAIEITQNRRKYQDEYNRAHGIIPHSATRNIEDSLK
VDDAAELLNKAKKMEKMPATERAKIIKELRKQMLEAAKNLEFEKAAALRDEIAKIKTI
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaattttgaaatcagtagtaaatttagcccaagtgatgaccaaaaaaaggctatc
gagggcatagtaaattcggttaaatcaggcagccactaccaaactctgcttggagttact
ggaagcggcaaaacttttactatggcaaatgttataaaagagttaaatatgccaactctt
atcatgactcacaacaaaagcctagccgcgcaactttatagcgaatttaagggctttttt
ccgcgcaatcatgttgagtattttataagttattatgattattatcagccagaagcttat
ataccaagacaagatttgtttatagaaaaagacagctcgataaatgatgagttagaaaga
cttagactttctgcgactgcaagtttgctaagttttgatgatgttataactatagcttca
gtctctgcaaactacggtttgggaaacccagccgagtatcaaggtatggttttaatcctt
gaagttggagcaaatttaagctccaaagccctacttcgcaaacttgtcgatatgggatat
aaaagaaatgatagcttttttgatagaggagattttcgtgtaaatggcgatgtaatcgac
atctatccagcttattttagcgatgaagcgatacgcttagagttttttggcgatgagctt
gaagagatgtatcacttcgatgttttagaaaacaaacgaggaagtagtgtaaataaattt
atcctttatgcaacaagtcagttcatagtaggagaagaccgcctaaaaatcgctattaaa
gagatagaagtcgagcttgaaaaaaggttaaagttttttaacgaaaacgacaaactagta
gaagcgcagcgcctaaaacagcgcgttgagtttgatttagagatgttaaatgcaactggt
atgtgtaaaggcgtggaaaactacgctcgccacctaacaggacaagcgccagggcaaact
ccatactcgctttttgattactatgaagttaagggggttgattatctagttatagtcgat
gaaagtcatgtgagtttaccacaatttcgcggtatgtatgcaggcgatagaagccgaaaa
gagactcttgtcgagtatggttttaggcttccttcagcgcttgataaccgtcctttgatg
tttgatgagtttatcagcaaaaggggcttttttctctttgtctctgctacaccaaatgag
cttgaactaaatctttcaaacgggcatatctatgagcaaattttgcgcccgacaggtctg
cttgatccagaaatcacgataaaagatagtgataatcaagttgaacttttatacgacatg
gcaaaagaagttatagcaaggaatgagcgtgttttagtaaccgtgcttactaaaaaaatg
gcagaagagcttagtcgttactatcttgagcttggcataaaagtaaaatatatgcactca
gatatcgatgcggtggagcgaaacgagctaatacgtggacttaggtttggcgactttgat
atgcttatcggtataaatttgcttcgtgaggggctagacttgcccgaagttagcctgata
gctatcatggatgcagacaaagagggctttttgcgctcacgcacaagcctaatccaaaca
atggggcgagctgctaggaatttaaacggcaaggttgtgatgtttgctaaaaagattaca
aattctatgaaagaagctatagaaatcacgcaaaataggcgaaaatatcaagatgaatac
aaccgcgctcacggcattatcccacactctgcaactagaaatatagaagatagcttaaag
gttgatgatgcggctgaacttttaaataaagctaaaaagatggaaaaaatgccagcaact
gaacgagctaaaatcatcaaagagcttagaaaacagatgcttgaggcggctaaaaacctt
gagtttgaaaaggcagccgcacttcgtgatgagatagctaagataaaaacgatttag
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