Campylobacter geochelonis: CGEO_1499
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Entry
CGEO_1499 CDS
T06802
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cgeo
Campylobacter geochelonis
Pathway
cgeo03030
DNA replication
cgeo03430
Mismatch repair
cgeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGEO_1499 (dnaE)
03430 Mismatch repair
CGEO_1499 (dnaE)
03440 Homologous recombination
CGEO_1499 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgeo03032
]
CGEO_1499 (dnaE)
03400 DNA repair and recombination proteins [BR:
cgeo03400
]
CGEO_1499 (dnaE)
Enzymes [BR:
cgeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGEO_1499 (dnaE)
DNA replication proteins [BR:
cgeo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGEO_1499 (dnaE)
DNA repair and recombination proteins [BR:
cgeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGEO_1499 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QKF71783
LinkDB
All DBs
Position
complement(1678916..1682557)
Genome browser
AA seq
1213 aa
AA seq
DB search
MSEFTHLHLHTEYSLLDGANKIGELAKTLKERGSTSVAMTDHGNMFGAIDFYKTMRKNGI
KPIIGIEAYIHNHDEINDTSDKQRFHLILLAKNEAGYKNLMYLSSMAYLDGFYYNPRINK
KVLKEHSDGIVCSSACLQGEVSFHLNQSERNLKRGAKGYERAKEVALEYKEIFGDDFYLE
IMRHGIGDQLKIDDMLIRLSKETGIKLIATNDTHYTFKSRANAHEAFMCIAMGKTIDDPN
RLKHSVHEFYVKTDDEMKALFADIPEAISNTQEICDKCNLSFAFDNKDYRPTPPNFKFSI
EYAKDLGLNLPKPDERYSKENDDFLFRYESRRGLENRLKFIDQSKHQDYKERLEIELDII
ENMGFSGYMLIVYDFIKWAKENDIPVGPGRGSAAGSLCAYSLRITDLDPLPYNLLFERFL
NPARISMPDIDVDFCQERRGKVIDYVVEKYGKANVAQVATFGKLLARGVIRDVARVCDMP
LRDADAMAKLIPEILGITLNGDGDPQSPKYKPGAYQLEPKLKELIENNAMATRVWKLALD
LEGLNRNAGMHAAGVVISNEPLWSKVPLFRQTKNDDGHYITQYTKDYLEDVDLIKFDFLG
LKNLDVIDNAIKLVKMRYNKDIVWENIDFNDPRTYKTIQSGNNLGLFQIEGAGMQDLASS
LKPDCFEDIIAMISLYRPGPMDLIPDFIARKHGRAKVEYLMNEVKDILEPTYGIIVYQEQ
VMQIVQKIGGFSLGEADLVRRAMGKKEEKKLAAMKAQYLDGAKNLGYDVKKADELFELIM
KFASYGFNKSHAAAYSMITFQTAYLKTYYPAEFMAALLTAEENNIDKVAKYIDEIKRLDI
DILPPSINNSYRQFSVIQKDGKDAIIFGMGAIKGVGYGAIENIVKERENGEFKDINDFVS
RIDSFKVNKRVIDSLIKAGAMDCLGLSRKTLVQNIESITDACRSSAKIKNDAQNSLFGLE
DGIAEVEVNLVENGGEFDLKTLLKLEKESLGIYISGHPLDEYADLIKDVKYTLTSEFEEL
EQITETILVGKIEEIDVKITKSGKKMGIVSVIDLHGNFEMVVFDNVLKDLERLDKDELDM
PHAFRVRIIKDESQYKITLNEFLTIEEVKNGDFKKKSYNKGNGYASKNSGANGYKKSDEV
ARVIENYEFFIELAKLDKERIDKIYRFAYASNNPKNSKKLILKVAFNSKIFIYETNFFID
ESFINKVNEILVA
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatttacacatttacatcttcacacagaatactcgctccttgatggagcaaac
aaaatcggcgaacttgcaaaaacgcttaaagagcgcggaagcactagtgtagcgatgaca
gatcatggaaatatgtttggtgctattgatttttataagacgatgcgaaaaaacggcata
aagccaattataggcatagaagcttatatccataaccacgatgagataaatgacactagc
gataaacagcgctttcacttgattttacttgccaaaaatgaagcagggtataaaaatttg
atgtatttaagctcgatggcgtatttagatggattttactataacccgcgaatcaacaaa
aaggttttaaaagagcacagcgatgggatagtctgctcatctgcttgtttgcaaggcgag
gttagttttcacttaaatcaaagtgagagaaatttaaaaagaggcgcaaaaggctatgaa
agagccaaagaggttgcgttagaatacaaagagatttttggtgatgatttttatcttgag
attatgcgtcatggtatcggcgatcagcttaaaatcgatgatatgttaatccgcctttca
aaagagacaggcataaaactaatagcaacaaacgacactcactacacttttaaaagcaga
gccaatgcgcacgaagcatttatgtgtattgcgatgggaaagacaatcgatgatccaaac
cgcctaaagcacagcgttcatgagttttatgtaaaaacagatgatgagatgaaagccttg
tttgccgatatcccagaagcgatttcaaatacgcaagaaatttgcgataagtgcaaccta
agctttgcatttgataacaaagattaccgtccaacgccgccaaattttaaattttccatt
gagtatgctaaggatttgggtctgaatttaccaaaaccagatgagagatacagcaaagaa
aatgatgactttttgtttcgttatgagtcgcgtcgtggacttgaaaataggttaaaattt
atcgatcaaagcaaacatcaagattataaagaacgtcttgaaattgagcttgatatcata
gaaaatatgggcttttcaggctatatgctcatagtttacgactttataaagtgggctaag
gaaaacgatattccagtaggtccagggcgtggttcggcggctggaagtttgtgtgcttac
tcgcttcgtataacagaccttgacccacttccttataacttgctttttgagcgttttttg
aatccagctcgtataagtatgccagatatcgatgtggacttttgtcaagaaagaagaggt
aaagttatagactatgtcgtagagaaatatggcaaagccaatgtcgcgcaagttgcgacc
tttggtaaacttttggctcgtggagttataagagatgttgctagggtttgtgatatgcca
cttcgtgatgctgatgcgatggcgaagttgattcctgaaattttaggaatcactttaaac
ggcgatggagatccacaaagcccaaaatacaaaccaggagcatatcagcttgagccaaag
ctaaaagagcttatagaaaataacgctatggcgacaagagtttggaagcttgcgcttgat
ttagaagggttaaatagaaacgctggcatgcacgcagctggagttgttatctcaaatgag
ccactatggagcaaagtcccgctttttaggcagactaaaaacgatgatggacactatatc
acgcagtatacaaaagactatcttgaagatgtggatctgataaaatttgactttttgggt
ctaaaaaacttagatgtgattgataatgcaatcaaacttgttaagatgcgttataacaaa
gatatcgtgtgggaaaatatcgattttaacgatccaagaacttataaaactatccaaagc
ggaaacaacttagggctttttcaaatagaaggcgctggtatgcaagacttagcttcaagt
cttaagccagactgttttgaggatatcatcgcgatgatttcgttatatcgtccaggacct
atggatcttatacctgattttatcgctagaaaacacggcagagccaaagttgagtatcta
atgaatgaagttaaagatatcttagagccaacttacggaatcatcgtttatcaagagcaa
gttatgcaaatcgtgcaaaaaatcggcggcttttcgcttggcgaagcggacttagtgcgc
cgcgcgatgggtaaaaaagaggagaaaaaacttgctgctatgaaagcacaatatcttgat
ggagcaaaaaatttaggttatgatgtaaaaaaagcagatgagctttttgagttgattatg
aaatttgcttcatatggatttaacaaatcccacgcagctgcttactcgatgataactttt
caaactgcgtatttaaaaacctactatccagccgaatttatggcagctttgctaacagca
gaggaaaataacatcgataaggttgcaaagtatatagatgagataaaacgccttgatatc
gatatcttgccaccttcgattaacaactcatataggcaatttagcgttattcaaaaagat
ggaaaagatgctattatctttggaatgggcgctattaaaggtgttggatacggcgcgata
gaaaacatcgtaaaagagcgcgaaaatggcgaatttaaagatataaacgactttgtttca
cgaatcgatagtttcaaggtaaacaaaagagtcatagactctttaatcaaagctggagcg
atggactgcttaggacttagtagaaaaacgcttgtgcaaaatatagagagcataactgat
gcttgtagaagttcagctaaaatcaaaaatgatgcgcaaaactcgctttttgggctagaa
gatggtatagcagaagttgaggtaaatttagtcgaaaatggtggtgagtttgatttaaaa
accttgttaaaacttgaaaaagagagccttggaatctacatttcaggacatccacttgat
gaatatgctgatttgataaaagatgtaaaatacacgctaacaagcgagtttgaagagctt
gagcagataactgaaactattttggttggtaaaattgaagagatagatgtaaagataaca
aaatctggtaaaaaaatgggcatagtctcagtcatagacttgcatggaaactttgaaatg
gtcgtgtttgacaacgttttaaaagacttagaacgactagataaagatgagcttgatatg
ccacacgcctttagagttagaattatcaaagatgaaagtcagtataaaatcacgctaaat
gagtttttaaccatagaagaggttaaaaatggcgattttaagaaaaaaagctataacaag
ggcaatggttatgctagcaaaaatagtggtgcaaatggatataaaaaaagcgatgaagta
gcaagagtgatagaaaactatgagttttttatagagctagccaagctagataaagagcga
atcgataaaatttaccgctttgcatatgcgtcaaacaaccctaaaaatagcaaaaaactt
atcttaaaagtagcgtttaatagtaaaatttttatttatgagacaaacttttttatagat
gagagctttataaataaagtaaatgagattttggtagcttaa
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