Campylobacter geochelonis: CGEO_1627
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Entry
CGEO_1627 CDS
T06802
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
cgeo
Campylobacter geochelonis
Pathway
cgeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGEO_1627 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgeo03021
]
CGEO_1627 (rho)
03019 Messenger RNA biogenesis [BR:
cgeo03019
]
CGEO_1627 (rho)
Transcription machinery [BR:
cgeo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CGEO_1627 (rho)
Messenger RNA biogenesis [BR:
cgeo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CGEO_1627 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
AAA_25
Mor
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QKF71903
LinkDB
All DBs
Position
complement(1799319..1800617)
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AA seq
432 aa
AA seq
DB search
MENNKKQHTRTHVPVDGHKIEELRTLDLDSLVKIALDMGVENPREFRRQELVFEILKTQT
KQGGFILFTGILEITNDGYGFLRGIDSNLSDSVNDAYVSLSQIRKFALRVGDIVTGQVRE
PKDQEKYYALLKIEAINYKTIQEAKERPLFDNLTPLFPTQKLKLEYDATHLTGRVLDLFT
PIGKGQRGLIVAPPRSGKTEIMKELAHGIARNHPEVQLLVLLVDERPEEVTDMQRSVKGE
VFSSTFDQPALNHVRVAELVIEKAKRSVEMGKDVVILLDSITRLARAYNTVTPSSGKVLS
GGVDANALHKPKRFFGAARNIENGGSLTIVATALIETGSRMDEVIFEEFKGTGNSEIVLD
RNISDRRIYPAINILKSGTRKEELLQGPDNLQKIWALRSAIATMDDVEALKFLYSKMLKT
KNNEELLSIMNE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaacaaaaaacaacacacaagaactcatgttccagttgatgggcacaaaata
gaagagcttagaacgctagatctcgattcgcttgttaaaatcgcacttgatatgggcgtt
gaaaacccgcgtgaatttcgccgtcaagagcttgtttttgagatacttaaaactcaaacc
aaacaaggcggctttatactatttaccggtattttagagattacaaacgacggatatggc
tttttaagagggattgactcaaatttaagcgatagcgtaaatgatgcttatgtaagctta
tctcaaattcgcaaatttgcccttcgtgttggagatatcgtaactggacaagttagagag
ccaaaagatcaagaaaaatactacgcgcttttaaaaatcgaagcgattaactataaaacc
attcaagaggcaaaagaaagaccactttttgataacttaactccactttttccaacacaa
aaactaaagctagagtatgatgcaacgcatttaactggaagagtgctagatctttttacg
ccgattggaaagggacagcgtgggctgatagttgctcctccacgaagtggtaaaacagaa
ataatgaaagagttagctcatggaatcgcgcgaaatcacccagaagttcaacttttggtt
ttgctagttgatgaaagacctgaagaggttactgatatgcaaagaagcgttaagggcgag
gtgtttagctcaacttttgaccaaccagcgcttaaccatgttagggttgcagagctagtc
atagaaaaggcaaaaagatctgttgagatgggaaaagatgttgtgattttacttgatagt
ataacaagactagcaagagcgtataacacagtaactccaagcagcggcaaagtgctaagt
ggtggcgttgatgcaaatgcgcttcataaaccaaaacgcttttttggtgcagctagaaat
atcgaaaatggcggaagcttgactatcgttgcaactgcgttaatcgaaactggctcaaga
atggatgaggtgatttttgaagagtttaaaggcactggaaacagcgaaatcgtgcttgat
agaaacattagcgataggcgaatttatccagcgataaacatcttaaaaagcggaactaga
aaagaagagttgcttcaaggacctgataatctacaaaaaatttgggcgcttcgttcggcg
attgcgacgatggatgatgttgaagcacttaaatttttatactcaaaaatgctaaaaact
aaaaacaacgaagaacttctttctatcatgaacgagtag
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