Campylobacter geochelonis: CGEO_1920
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Entry
CGEO_1920 CDS
T06802
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cgeo
Campylobacter geochelonis
Pathway
cgeo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CGEO_1920 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgeo03021
]
CGEO_1920 (rpoA)
03400 DNA repair and recombination proteins [BR:
cgeo03400
]
CGEO_1920 (rpoA)
Enzymes [BR:
cgeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CGEO_1920 (rpoA)
Transcription machinery [BR:
cgeo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CGEO_1920 (rpoA)
DNA repair and recombination proteins [BR:
cgeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CGEO_1920 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
QKF72184
LinkDB
All DBs
Position
complement(2130009..2131022)
Genome browser
AA seq
337 aa
AA seq
DB search
MRKITTSAYMPTDIKVENVGPNVAKVIAYPFETGYAVTVAHPLRRLLYTSTVGFAPTAIK
IDGVSHEFDSIRGMLEDVAVFIINLKNLRFKIKGDSKREIIEYSFNGPKEIKGSDLTNSV
IEIVNPDAYLATINEDADLKFTIIVEKGIGYVPSEELRDYIDNDYMALDAFFTPVKRAVY
EIENVLVEDNPDYEKIIFTITTDGQIGPIVAFKNALEAMYQQLSVFGGIVDIDIPANVSS
PAQTGEHSKLFESVENLNLSARSFNCLDRADVRFIGELALMEENELKDLKNLGKKSLEEI
KSIMEEIGYPVGTPELADQKEQLLKKIKDLKTQKSEG
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaatcacaacgtcagcctatatgccaactgatataaaagtagaaaatgttggg
ccaaatgtagctaaagttatagcatatccttttgaaacaggatatgcggttactgttgcg
catccgcttagaagacttttgtatactagtacagttggttttgctcctactgctattaaa
attgatggcgttagtcatgaatttgacagcataagaggtatgcttgaagatgttgcagtt
tttattataaatttaaaaaatcttagatttaaaataaaaggcgattctaaaagagagatt
atcgagtatagtttcaatggcccaaaagagataaaaggtagcgatttgactaactctgtt
atagagatagtaaatccagatgcatacctagcaactatcaacgaagatgctgatttaaaa
tttacaattattgtagaaaaaggtatcggatatgttccaagtgaagagttaagagattat
atcgataatgattacatggcactagatgcattttttacacctgtaaaaagagcagtttac
gagatagaaaatgttcttgttgaggacaacccagactatgaaaagattatttttacgatt
acgactgatggacagataggaccaatagttgcatttaaaaatgcgcttgaagcgatgtat
caacaactatcagtttttggcggtatcgtcgatatagacataccagctaatgtaagtagc
ccagctcaaactggtgagcactcaaagctttttgaaagcgttgagaacctaaatttaagc
gctagaagttttaactgtttagatcgtgctgatgtaagatttatcggagagcttgcactt
atggaagagaatgagctaaaagatttaaaaaatcttggtaaaaaatctcttgaagagata
aaatctataatggaagagataggttatcctgtcggaactccagagttagcagaccaaaaa
gagcagttgcttaaaaaaattaaagatttaaaaacacaaaagagcgaaggataa
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