Croceiramulus getboli: P8624_00470
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Entry
P8624_00470 CDS
T11636
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cget Croceiramulus getboli
Pathway
cget03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cget00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P8624_00470 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cget03021
]
P8624_00470 (rpoC)
03400 DNA repair and recombination proteins [BR:
cget03400
]
P8624_00470 (rpoC)
Enzymes [BR:
cget01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P8624_00470 (rpoC)
Transcription machinery [BR:
cget03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P8624_00470 (rpoC)
DNA repair and recombination proteins [BR:
cget03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P8624_00470 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
BSH_YknX
BSH_RND_rel
Motif
Other DBs
NCBI-ProteinID:
WGK65040
LinkDB
All DBs
Position
complement(103758..108059)
Genome browser
AA seq
1433 aa
AA seq
DB search
MTRHNDKNTQPRFNKISIGLASPEAILAESRGEVLKPETINYRTHKPERDGLFCERIFGP
VKDYECACGKYKRIRYKGIVCDRCGVEVTEKKVRRDRVGHINLVVPVAHIWYFRSLPNKI
GYLLGLPSKKLDMIIYYERYVVIQPGIAKNEDGEEVQKMDFLTEEEYLNIMETLPQENQY
LEDSDPNKFIAKMGAECLIELLRRIDLNDLSYELRHKANNETSKQRKTEALKRLQVVEAL
RDSNKNRENLPEWMIMKVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLM
EIKAPEVILRNEKRMLQESVDSLFDNTRKSSAVKTDSNRPLKSLSDSLKGKQGRFRQNLL
GKRVDYSARSVIVVGPELKLFECGLPKDMAAELYKPFVIRKLIERGIVKTVKSAKKIIDK
KEPVVWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLVCTAFNADFDG
DQMAVHLPLGPEAILEAQLLMLASHNILNPANGAPVTVPSQDMVLGLYYMTKARKSTKEY
PVKGEGITFYSAEEVTIAYNEGIVDINAIIKVRAKDFNEEGELVNKIIETTVGRVLFNEA
VPEEAGFINEVLTKKALRDVIGNVLKLTSVPRTADFLDMIKTMGYGYAFKGGLSFSLGDI
IIPEEKSAMIDDANGQVEQIMSSYNMGLITNTERYNQVIDVWTSTNATLTELAMKRIRED
QQGFNSVYMMLDSGARGSKEQIRQLTGMRGLMAKPKKSNDGGGAIIENPILANFKEGLSI
LEYFISTHGARKGLADTALKTADAGYLTRRLVDVSQDVIVNSEDCDTLRGIEVAALKKNE
EVIETLEDRIIGRTSLNDVINPLNNEVIVSAGDLIDEKIAAEISKAPIETVEVRSALTCE
APKGICVKCYGRNLATNKMVQIGEAVGVVAAQSIGEPGTQLTLRTFHVGGIAGNISEENK
LVAKFDGVLEIDDLKTVDGEDSDGNKAQIVISRTSEAKITDAKTGIVLSTNNIPYGSQLF
MEEGTKVKKGDVICQWDPYNGVIISEFAGKIKYENIEQGVTYQVETDEQTGFQEKVISES
RNKKLIPTLHIEGKKGEVIRSYNLPVGAHLMVDDGDKIKIGKVLVKIPRKSAKAGDITGG
LPRVTELFEARNPSNPAVVSEIDGVVSFGKIKRGNREIIVESKLGEVKKYLVKLSNQILV
QENDYVRAGMPLSDGSVTPNDILSIKGPSAVQQYLVNEVQEVYRLQGVKINDKHFEVVVR
QMMRKVRIQDPGDTIFLENQLVHTSDFIEENDAIFGMMVVEDAGESETLKAGQIISPREL
RDANSILRREDKNLVTAREVVPATATPVLQGITRASLQTKSFISAASFQETTKVLNEAAV
AAKVDTLEGLKENVIVGHRIPAGTGMRRYDHIIVGSKEELEELTAEKQEVNFN
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgacaagacataatgataaaaatacccagcctcgatttaacaaaatctctataggctta
gcgtctcccgaagcgattttggctgaatctcgaggggaagtgcttaaaccagaaaccatc
aactaccgaacgcacaagccggaacgggatggtttattctgtgagcgcatttttggtcca
gtaaaggattatgagtgtgcctgtggaaaatacaagcgtattcgatataagggcatcgtc
tgtgaccgatgtggtgtagaggtgactgagaagaaagtccgtcgtgaccgcgtaggacat
atcaacctggtggttcctgtagcgcacatctggtatttcagaagtcttccaaacaaaatt
ggataccttttaggcttaccgtctaagaaattagacatgatcatctactacgagcgttac
gtagtgatccagccgggtattgccaagaatgaagatggagaagaagttcagaaaatggac
ttcctgaccgaggaggagtacctgaatatcatggaaacgctaccgcaggagaatcagtat
ctggaggatagtgatccaaacaaatttatcgctaagatgggtgcagaatgcttgattgag
ctgttgcgtcgcatcgatcttaacgatctatcttatgaattgcgccataaggcgaacaac
gaaacctctaagcagcgtaaaacggaagcgttgaagcgtttgcaagtggtggaggcctta
cgcgattccaacaagaacagagagaacttaccggagtggatgatcatgaaggtagttccc
gtcatcccaccagaattgcgccctttggtgccattggatggaggacgttttgcgacttca
gacttaaatgacttgtatcgtcgtgtgattatccgtaacaaccgtttaaagcgattgatg
gagattaaagcaccggaggtgatcttgcgtaatgagaagcgtatgttgcaagagtcagta
gactccttgtttgataacacacgtaagtcttctgcggttaagaccgacagcaaccgacca
ctaaagtcactttctgactccctaaaaggaaagcaaggacgtttccgtcaaaacctattg
ggtaaacgtgtggattattcagcacgttcggtgatcgttgttggaccggagttgaaatta
tttgaatgtggtcttcctaaggatatggccgctgagctgtacaagccttttgtgatccgt
aagctcattgagcgcggaatcgtaaagacggtaaagtcggcgaaaaagatcattgataaa
aaagaaccggttgtttgggacattctagaaaatgtcttgaaaggacatcctgtactcttg
aaccgtgctcctaccttgcaccgtttaggaatccaggccttccagcccaaattgatcgaa
ggaaaagcgatccagttacaccccttagtctgtacggcatttaacgccgactttgatggg
gatcaaatggcggtacacctgcctttaggaccggaagctattctggaagcgcagctattg
atgctggcttctcataatattttgaaccctgccaacggggcaccggtaacggtaccttct
caggatatggttctgggtctgtattacatgaccaaggcacgtaagagtacgaaggaatac
ccggtgaaaggtgaaggcattaccttctattctgcagaggaagttaccatcgcttacaac
gaagggattgtggatatcaacgccataatcaaggttcgtgcaaaggacttcaatgaagaa
ggtgaactcgtcaataagatcatcgagaccacggtaggtcgtgtattgttcaatgaagca
gtaccggaagaagctggtttcatcaacgaagtactgacgaagaaggcgctgcgtgatgtt
attggtaacgtactgaaattgaccagtgtacctcgtacagctgacttcctggatatgatc
aaaaccatgggatacggatacgcctttaaaggaggtctttcgttctccctaggagatatt
atcatcccggaagaaaagagcgcgatgattgacgatgccaacggacaggtagagcagatc
atgtcaagttataacatgggtctcatcaccaacactgagcgttacaatcaggttattgat
gtatggacctctaccaatgctacccttactgaattggcgatgaagcgaattcgtgaggac
cagcaaggattcaactcggtatacatgatgttggattctggagctcgtggatctaaagaa
cagatccgtcagctgactggaatgcgtggattgatggctaagccgaaaaaatccaacgat
ggcggtggagcgattatcgagaacccgattctcgcgaactttaaagaaggtctttcgatt
ctcgagtactttatttctactcacggggcgcgtaaaggtcttgcagataccgcattaaaa
acggcagatgctggatacttaacccgtcgactggtagatgtttctcaagacgtgatcgtg
aacagtgaagattgtgataccttaagaggtattgaagtcgctgcactcaaaaagaatgaa
gaggtcattgagaccctggaagatcgaatcattggtcgaacttcactaaacgatgtgatc
aacccattgaacaatgaggtcatcgtaagtgcaggagatctgattgatgaaaagatcgcc
gctgagatcagtaaagcgcccattgaaaccgtagaggttcgttccgctttgacctgcgag
gcgcctaagggaatctgtgtgaaatgttacggtcgtaatctggccaccaataagatggtt
cagattggagaggctgtaggtgtagttgcggctcagtccattggagaaccgggtactcag
cttacgctacgtaccttccacgttggaggtattgcaggtaacatctctgaagagaacaaa
ttggtcgccaaatttgacggtgttcttgaaatcgatgatctgaaaaccgtagatggagag
gatagcgatggaaataaggctcagatcgtgatttcacgtacttcagaagccaaaattacc
gacgctaagaccggaatcgtgttgagtaccaacaacattccttacggttcccaactcttt
atggaggaaggtaccaaggtcaagaaaggcgatgtgatctgtcaatgggatccctataac
ggagtgatcatttcagaatttgccggtaagatcaagtatgagaatattgagcaaggagtt
acgtatcaggtggaaacggatgaacaaaccggcttccaggaaaaagtaatttctgaatct
agaaataaaaagctgatcccaaccctgcatatcgaagggaagaaaggagaagttattcgt
tcgtataacctacctgtgggtgcccacttgatggtagatgacggagataagatcaagatc
ggtaaagtcttggtgaagattccacgtaagtctgcgaaagcaggggatattaccggaggt
cttccacgagtgaccgaattgttcgaggctcgtaatccatccaacccggctgtggttagt
gagattgatggtgtagtttctttcggtaaaatcaagcgaggtaatcgcgagatcatcgta
gaatcgaaattgggtgaagtcaagaaatacctggtaaaactttctaatcaaatcctggta
caggaaaatgattatgtgagagcgggaatgccattatctgatggttcagtgacccctaat
gatatcctttcgatcaaaggtccatcagcggtacagcagtacctggtgaatgaggttcag
gaagtctatcgtttgcagggtgtgaagatcaacgacaagcactttgaggtggtcgttcgt
caaatgatgcgtaaagtgcgtattcaggatccgggtgatacgattttcttagaaaatcaa
ttggtacatacctctgactttattgaagagaacgatgcgatttttggaatgatggtggtt
gaggacgctggtgagtcagaaacgcttaaagcgggtcagatcatttctcctcgtgagctt
agagatgccaatagcatcctacgtcgcgaagacaaaaatctggtcactgctcgtgaagta
gtgccggcaacagcgactccagtcttgcaagggatcactcgtgcatcactacaaaccaag
tcgtttatttctgctgcatccttccaggaaacaaccaaggtattgaacgaggcagcggta
gccgccaaagtcgacaccttagaaggtctgaaggagaatgttatcgtaggacaccgtatc
ccggctggtaccggaatgcgcagatacgatcacatcatcgtaggcagcaaggaagagttg
gaagaactgaccgctgaaaagcaggaagtcaactttaattaa
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integrated database retrieval system
