Corynebacterium guangdongense: CGUA_05250
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Entry
CGUA_05250 CDS
T09371
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cgf
Corynebacterium guangdongense
Pathway
cgf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGUA_05250 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgf03019
]
CGUA_05250 (deaD)
03009 Ribosome biogenesis [BR:
cgf03009
]
CGUA_05250 (deaD)
Enzymes [BR:
cgf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CGUA_05250 (deaD)
Messenger RNA biogenesis [BR:
cgf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CGUA_05250 (deaD)
Ribosome biogenesis [BR:
cgf03009
]
Prokaryotic type
rRNA helicases
CGUA_05250 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
Cas3-like_C_2
adh_short
Motif
Other DBs
NCBI-ProteinID:
WJZ17635
LinkDB
All DBs
Position
1101572..1103929
Genome browser
AA seq
785 aa
AA seq
DB search
MSITDENATGGVNEPDNNITSESQNNPQGDAAQAASATDGPITIDDVMSTDEGSTAAGQV
TGDADSSEAAGSESKDSDNADNQGDIAAETSEVENTDAISNADATVAPTPEQEAAANDTT
SDQATKPEKTEPEGPSFDNLGLPDNVVAAVKKVGFETPSAIQAETIPVLMQGRDVVGLAQ
TGTGKTAAFALPILARIDASQRSPQALVLAPTRELALQVADSFQSFADHLGEKISVLPIY
GGQAYGIQLSGLRRGAQIVVGTPGRVIDHLEKGTLDISNLRFMVLDEADEMLNMGFQEDV
ERVLRDTPDDKQVALFSATMPNGIRRISKQYLNDPVEVTVKAQQRTNTNITQRYLYTAHR
NKLDAFTRILEVTEFDAMIVFVRTRHETEEVAEKLRARGFNAAAINGDIAQNQRERTIDQ
LKDGRLDILVATDVAARGLDVDRISHVFNYDIPNDTEAYVHRIGRTGRAGRSGEAILFVT
PRERRMLRSIERATNARLEEMELPTVDEVNESRKEKFQDSITEALESKHLETFRGMVRSY
SESKDTPMEDIAAALAAQLQGSDDFFMKEPPKDKRDRRDRENWDRDERRDRDRGGRDDRR
DRDRGGARERHQSDENMETYRLAVGKRQHVRPGAIVGALANEGGLNSKDFGRITIAVDHT
LVDLPKNLGKDVLDRLSDTRISGQLINIEKDTGGQGHGERGGFRGGRDRDDRGGYRGGRD
RDDRGGRGGYRGNRDRDDRGGRGGRDRDDRGGFRGGRDRDDRGGYRGGRDRDDRGGRGGR
GGWRD
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaccgatgaaaacgccaccggcggcgtaaacgagccggataacaacatcacg
tcggaatctcagaacaacccgcagggtgacgcagctcaggctgcatctgccacggacgga
cccatcaccatcgacgacgtcatgtcgaccgatgagggctccaccgcggcaggccaggtc
accggggatgcggactcttctgaggcagccggctccgaatccaaggattcggacaacgca
gacaaccagggcgatatcgccgccgagacctcggaagtggaaaacacggacgccatcagc
aacgctgacgcgaccgtcgctcccaccccggagcaggaggccgccgccaacgacaccacc
tccgatcaggccacgaagcccgagaagaccgagcccgaaggtccctccttcgacaacctc
ggcctgcccgacaacgtcgtcgcagccgtcaagaaggtcggattcgagaccccgtccgcc
atccaggctgagaccatcccggtcctcatgcagggtcgcgacgtcgtgggcctcgcccag
accggcaccggcaagacggccgcgttcgcgctgccgatcctcgcgcgcatcgacgcctcc
cagcgcagcccacaggcgctcgtgctggcccccacccgcgagctcgcgctccaggtcgcc
gattccttccagtccttcgccgaccacctcggcgagaagatctccgtcctgccgatctac
ggtggccaggcctacggcatccagctgtcgggtctccgtcgcggcgcccagatcgtcgtc
ggtaccccgggtcgtgtcatcgaccacctggagaagggcaccctcgacatctccaacctg
cgtttcatggtcctcgacgaggccgatgagatgctgaacatgggcttccaggaggacgtc
gagcgcgtcctgcgcgacaccccggacgacaagcaggtcgccctgttctccgcgaccatg
cccaacggcatccgccgcatctccaagcagtacctcaacgacccggttgaggtgacggtg
aaggcgcagcagcgcaccaacaccaacatcacccagcgctacctctacaccgcgcaccgc
aacaagctggacgccttcacccgcatcctcgaggtcaccgagttcgacgcgatgatcgtc
ttcgtgcgcacccgccacgagaccgaggaagtcgccgagaagctgcgcgcccgcgggttc
aacgccgccgccatcaacggcgacatcgcgcagaaccagcgtgagcgcaccatcgaccag
ctcaaggacggccgcctggacatcctggtggccaccgacgtcgccgcccgtggtctcgac
gttgaccgcatctcgcatgtgttcaactacgacatcccgaacgacaccgaggcctacgtg
caccgcatcggccgcaccggtcgtgccggccgctctggtgaggcgatcctcttcgtcacc
ccgcgcgagcgccgcatgctgcgttccatcgagcgtgccaccaacgcacgtctcgaggag
atggagctgccgaccgtcgacgaggtcaacgagtcccgcaaggagaagttccaggactcc
atcaccgaggcgctcgagtctaagcacctggagaccttccgtggcatggtccgttcctac
tcggagtccaaagacaccccgatggaggacatcgccgccgctctcgcagcccagctgcag
ggttccgacgacttcttcatgaaggagccgccgaaggacaagcgcgaccgtcgggaccgt
gagaactgggaccgcgacgagcgtcgggatcgcgaccgtggcggtcgtgacgaccgtcgt
gaccgcgaccgtggcggcgcccgcgagcgtcaccagagcgacgagaacatggagacctac
cgtctcgccgtcggtaagcgtcagcacgttcgcccgggcgccatcgtcggcgcgctggcc
aacgagggcggcctgaactccaaggacttcggccgcatcaccatcgccgtcgaccacacc
ctggtcgacctgccgaagaacctcggcaaggacgtcctggaccgtctctccgacacccgg
atctccggccagctcatcaacattgagaaggacaccggcggtcagggccacggcgagcgc
ggcggattccgcggcggccgtgaccgtgacgaccgcggtggctaccgtggtgggcgcgac
cgtgacgaccgtggtggacgcggcggctaccgcggcaaccgtgaccgtgacgaccgcggt
ggacgcggcggccgtgaccgggatgatcgcggcggattccgcggcggccgtgaccgtgac
gaccgcggtggctaccgtggtgggcgcgaccgtgacgaccgcggtggacgcggcggccgt
ggcggctggcgcgactag
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