Corynebacterium glutamicum SCgG2: C629_06820
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Entry
C629_06820 CDS
T02691
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cgg
Corynebacterium glutamicum SCgG2
Pathway
cgg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C629_06820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgg03021
]
C629_06820
03019 Messenger RNA biogenesis [BR:
cgg03019
]
C629_06820
Transcription machinery [BR:
cgg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
C629_06820
Messenger RNA biogenesis [BR:
cgg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C629_06820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
S1CSD-TOTE-2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGN21964
LinkDB
All DBs
Position
1457070..1459352
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AA seq
760 aa
AA seq
DB search
MTTTDNTAANQGELTALRLPDLRKIAADLGLKGTSALRKGDLINAISAAREGKPTAAAKK
TSPRKAPSRTRVTQPSAPVEQAQEAPAQTSTAPASAPSEETPAAPARRGRRRVTTTATTP
EPAAPAQSQPAEAQPAQTQAAQQEELPVAAKESAPATENTQGQSQGQAQGDEHDDRFESR
SAARRARRNRQRQIHRDGDDNANANTESEQNTPAQNATAQAESEQTAPPAQAEAAEQNQN
DNSESSENRSDNYRNNNRRSRNNRNNRNYRDNNESSDNAGQSSNDDADNNQARSEDNNDD
RRSRNNRNNDRNDRNDRNDRDNHNDDNDDRRNRRGRRNRRGRNDRNDRDNRDNRDNRDNS
NDGDNNQQDELQQVAGILDIVDHNVAFVRTTGYHAAPSDVFVSNQLIRRMGLRSGDAIEG
QVRMNQGGGNHNNHGRNRQKYNNLVRVEMVNGLPAEETRNRPEFGKLTPLYPNQRLRLET
EQKILTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNIANAISTNNPECYLMVVLVDER
PEEVTDMQRSVNGEVIASTFDRPPSEHTAVAELAIERAKRLVEQGQDVVVLLDSITRLGR
AYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTVIF
EEFKGTGNAELKLDRKISERRVFPAVDVNPSGTRKDELLLNPDEARIMHKLRRILSALDN
QQAIDLLIKQLKKTKSNAEFLMQVASSAPMAGTEKEEDYS
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaccacagacaacaccgcagcgaatcagggtgaactgaccgccctccgactgccg
gatctgcgcaaaattgccgccgaccttgggctcaagggaacctcggcattgcgtaagggc
gatctgatcaacgccatctctgcagcccgcgagggtaagccaaccgcagctgcgaagaag
acttccccacgcaaggccccatcacgcacccgtgtgacacagccttccgcaccggttgag
caagcacaagaagctcccgcgcaaacttcaactgcacctgcttcagcaccatctgaagag
actcccgcagctcccgctcgtcgtggacgtcgccgtgtaaccaccaccgcgaccacccca
gagccagcagcgcctgcacaatcccagcctgcagaagctcaaccagcacagactcaggct
gcacagcaagaagaacttcctgttgcagcgaaggagtccgcaccagctacagaaaatact
cagggccaatcccagggccaagctcagggcgatgagcacgatgatcgctttgagtcccgt
tctgctgcacgccgagcacgccgcaaccgtcagcgccagatccaccgcgatggcgatgac
aatgcgaatgcaaacacagagtctgagcagaacacccctgcccagaacgcaaccgcacag
gctgagtctgagcagactgcacctcctgcacaggctgaagcagctgagcagaaccagaac
gataacagcgagtcctccgagaaccgcagcgataactaccgcaacaacaatcgtcgttcc
cgcaacaaccggaacaatcgcaattaccgcgataacaacgagtcctctgataatgcagga
cagtccagcaatgatgatgccgacaacaatcaggcacggtctgaggacaataacgacgat
cgccgttctcgtaataaccgtaacaacgaccgcaatgatcgtaacgatcgcaatgaccgc
gacaaccacaacgacgacaacgatgatcgccgcaaccgtcgcggacgccgtaatcgccgt
ggacgcaacgaccgtaacgatcgcgacaaccgagataaccgggataaccgcgacaacagc
aacgatggcgacaacaaccagcaagatgagctgcagcaggtagcaggcatcctggacatc
gtggaccataacgtcgcattcgtgcgcaccaccggttaccacgctgcaccttctgacgtg
tttgtcagcaaccagctgatccgccgtatgggtcttcgttccggtgacgccattgaaggt
caggttcgtatgaaccagggtggtggcaaccacaacaaccatggtcgcaaccgtcagaag
tacaacaacttggtgcgcgtggagatggttaacggtcttcctgcggaagagactcgcaac
cgtcctgagttcggcaagctgactcctctgtacccgaaccagcgtctgcgtttggaaact
gagcagaagattcttaccactcgtgtgatcgacttgatcatgcctattggtaagggacag
cgtgctttgattgtgtcgccacctaaggctggtaagaccacgatcctgcagaacattgcg
aacgctatttccaccaacaacccagagtgctacctcatggttgttttggttgatgagcgt
ccggaagaagttactgatatgcagcgctccgtcaacggcgaagtgattgcttctactttc
gatcgtccaccatcagagcacactgcggttgctgagctggcgattgagcgtgcgaagcgc
ctggtggagcagggccaggacgtcgttgttctgcttgactccattactcgtttgggccgt
gcgtacaacaacagctcacctgcatcgggacgtattttgtccggtggtgtggattccaat
gcactgtacccgccgaagcgtttcttgggtgctgctcgaaacatcgaaaatggtggatct
ttgaccatcatcgcaactgccatggtggagaccggctctgctggtgacaccgtgatcttc
gaggagttcaagggcactggtaacgctgagctgaagctggatcgtaagatctctgagcgc
cgcgttttcccagctgtggatgttaatccttctggtactcgtaaggatgagctgttgctc
aacccggacgaggctcgcattatgcacaagctgcgtcgtattctgtctgcacttgataat
cagcaagccattgatctgttgatcaagcagctgaagaagaccaagtccaacgcggaattc
ctcatgcaggttgcttccagcgctccaatggcaggcacagaaaaagaggaggattactcc
taa
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