Corynebacterium glutamicum SCgG2: C629_09560
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Entry
C629_09560 CDS
T02691
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cgg
Corynebacterium glutamicum SCgG2
Pathway
cgg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C629_09560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgg03019
]
C629_09560
03016 Transfer RNA biogenesis [BR:
cgg03016
]
C629_09560
Enzymes [BR:
cgg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C629_09560
Messenger RNA biogenesis [BR:
cgg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C629_09560
Transfer RNA biogenesis [BR:
cgg03016
]
Prokaryotic type
tRNA degradation factors
C629_09560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_2
CagA
aRib
S1_RRP5
Flagellin_IN
Motif
Other DBs
NCBI-ProteinID:
AGN22510
LinkDB
All DBs
Position
complement(2059107..2061368)
Genome browser
AA seq
753 aa
AA seq
DB search
MSDVKYFEDTEFGLIEAVATIDNGDFGTRTIRFETGQLARQADGAVTTYLDDDTMLLATT
TASNQPREGFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILACRLIDRPLRPTFV
KGLRNEVQIVVTVMSMNPEDYYDVVAINGASAATRISGLPVSGAVGGVRMALVVDEKHPE
GQWVAFPTHAQHEQSVFEIVVAGRLVERKRGNKTFSDVAVMMVEAGASENVVNRVKDGAP
APTEKIVSDGLEAAKPFIDILCRAQEGLAQRVGNAAKEFPLFPPYTDEVYSAVERKVSKK
LASLLTLKAKQERDDATNAYMEEIEAELLPKFEASYSSAAEASKEIRAAYNAVMKSIVRR
MILTDHFRIDGRGVTDIRDLAVEVELIPRAHGSSLFERGETQILGVTTLDMLKMEQQIDS
LAPGDAKRYMHHYNFPPYSTGETGRVGSPKRREIGHGALAERAVLPVIPSREEFPYAIRQ
VSEALGSNGSTSMGSVCASTLSLYNAGVPLKAPVAGIAMGLVSGEIDGKTEYVALTDILG
AEDAFGDMDFKVAGTADFITALQLDTKLDGIPSKVLSDALEQARDARLTILNTMADVING
PDEMSKFAPRITTVKIPVAKIGELIGPKGKNINALTEETGANISIEDDGTVFISAADGAS
AEAAIEKINALANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGNGKRVEK
VDDVVKVGEKIQVEIADIDNRGKISLVPVVEED
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgtaaagtacttcgaagacaccgaatttggcctgatcgaggccgtcgcaacc
atcgacaacggtgacttcggaacccgcaccatccgttttgaaaccggccaacttgcccgc
caggcagatggtgcagtgaccacctacctcgacgatgacacgatgctgctggcaaccacc
accgcatccaaccagccacgcgagggctttgacttcttcccactgaccgtggacgttgaa
gagcgtatgtacgcagctggtcgcatccctggctctttcttccgtcgtgagggccgccca
tccaccgaagctatcctggcttgccgtctcatcgaccgcccactgcgcccaacctttgtt
aagggcctgcgcaatgaggttcagatcgttgtcaccgtcatgtccatgaaccctgaggat
tactacgatgtcgtagcaatcaacggagcttccgcagcaacccgcatctccggacttcct
gtctccggcgctgtcggtggcgttcgcatggcactggttgttgatgaaaagcacccagaa
ggccaatgggttgcattcccaacccacgctcaacatgagcagtccgtatttgaaatcgtt
gtggctggtcgcctcgtcgagcgcaagcgcggcaacaagaccttctctgacgtcgcagtg
atgatggtggaagctggcgcttccgaaaacgttgtcaaccgcgtcaaggacggtgcacca
gcaccaaccgaaaagatcgtctccgacggccttgaagcagctaagccattcatcgacatc
ctgtgccgcgcacaggaaggtctggcacagcgcgttggaaacgcagccaaggaattccca
ctgttccctccatacaccgacgaggtgtactccgcagtggagcgcaaggtatccaagaag
ctagcttctttgctgaccctgaaggcaaagcaagagcgcgacgacgctaccaacgcctac
atggaagaaatcgaagccgaactgcttccaaagttcgaggcttcctacagctctgcagct
gaagcgtccaaggaaatccgcgcagcatacaacgctgtcatgaagtccatcgtgcgtcgt
atgatcctcaccgatcacttccgcatcgacggccgcggagtcaccgacatccgtgacctg
gcagtagaagttgagctcatcccacgtgcgcacggttcctcccttttcgagcgtggcgag
actcagatcctcggtgtcaccaccctggacatgctcaagatggaacagcaaatcgactcc
ctggcaccaggcgatgcgaagcgctacatgcaccactacaacttccctccatactccact
ggagaaaccggtcgcgtgggctcaccaaagcgccgcgaaatcggccacggtgcacttgca
gaacgtgcagttttgccagtaatcccatcccgtgaggaattcccatacgcaatccgtcag
gtctctgaagctctgggctccaacggctccacctccatgggctctgtctgtgcatccact
ctgtccctgtacaacgctggtgttccactgaaggcacctgttgcaggtatcgccatggga
cttgtttccggtgaaatcgacggcaagaccgagtacgttgcactgaccgacatcctcggc
gcagaagacgcattcggcgacatggacttcaaggttgccggcaccgcagacttcatcacc
gcacttcagctggacaccaagctggacggcattccttccaaggtgctctccgatgcgctt
gagcaggcacgcgatgcccgactgaccatcctgaacaccatggctgatgtcatcaacgga
cctgatgagatgagcaaattcgctcctcgcatcaccaccgtgaagatcccagtggcaaag
atcggtgagctgatcggaccaaagggtaagaacatcaacgctcttaccgaagagaccggc
gcaaacatctccatcgaagatgacggcaccgtgttcatctctgcagctgacggcgcatct
gctgaagcggcgatcgaaaagatcaacgctctggcgaacccacagctgccaaaggttggc
gagcgcttcctcggaaccgtcgtcaagaccaccgcattcggcgcattcgtgtccttgctc
ccaggtcgcgatggccttgttcacatctccaagcttggtaacggcaagcgagtagaaaag
gtcgacgatgtggtgaaggttggcgagaagattcaggtcgaaatcgctgacatcgacaac
cgcggcaagatctccttggtcccagttgttgaagaggactaa
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