Capnocytophaga gingivalis: CGC50_02590
Help
Entry
CGC50_02590 CDS
T05260
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cgh
Capnocytophaga gingivalis
Pathway
cgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGC50_02590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgh03019
]
CGC50_02590
03016 Transfer RNA biogenesis [BR:
cgh03016
]
CGC50_02590
Enzymes [BR:
cgh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CGC50_02590
Messenger RNA biogenesis [BR:
cgh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CGC50_02590
Transfer RNA biogenesis [BR:
cgh03016
]
Prokaryotic type
tRNA degradation factors
CGC50_02590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
HutF_N
Tudor-knot
Myb_CC_LHEQLE
Motif
Other DBs
NCBI-ProteinID:
ATA86133
UniProt:
A0A250FLZ7
LinkDB
All DBs
Position
complement(534118..536301)
Genome browser
AA seq
727 aa
AA seq
DB search
MIPEVKKEIITLADGRTISIETGKLAKQADGSVVVQMGNAMLLATVVANKEAGEGVDFLP
LTVDYREKFAAAGRFPGGFFKREARPSDQEILTMRLVDRVLRPLFPKEYYCEVQVMIQLM
SHDENVMPDALAGLAASACLAVSDIPFDGPISEVRVGRINGEFIINPSAQQLAESDMDIM
VGASKEFVAMVEGEMDEVSEKDMANAIHFAHEAIKVQIEAQERLRERVGKTIRTYEVPQE
NEEVAKKIYDFCYDKCYAIAKENTTKHERSDKFDAVKEACKALFSEEELEEYAPLVSKYF
SKAQKEAVRNLILNEDLRLDGRNTKQIRPIWCEVGYLPSPHGSAIFTRGETQSLTTVTLG
TSREANVIDIPSEQGEERFYLHYNFPPFSTGEARPLRGTSRREVGHGNLAQRALKRMIPE
DCPYTVRVVSEILESNGSSSMATVCAGTLALMDAGIQMKKPVSGIAMGLITDGDKYAVLS
DILGDEDHLGDMDFKVTGTKDGITACQMDIKIKGLTYEILEKALEQAREGRMHILGKITD
TIAVPNPTVKPHAPKIVRLEMPKEYIGAFIGTGGKNIQDLQARTKTTIVVEEVGELGIVE
ILGTDADGIQEAVDAVYHVSFEPVEGEVYKVRVARLVEFGAFVEFVPGKDSLLHVSEIAW
ERVEKPSDVLKEGDIIEVKYLGIDPKTKKTRVSRKALLPRPENLEKREKPHSDKEKKDKP
HFKKDKK
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgattccagaagtaaaaaaagagataattactcttgccgatggacgtacaatctccatt
gaaacaggaaaattggccaagcaggccgatggttccgtagtggtacaaatgggcaatgcc
atgctcttggccacagtcgttgctaataaggaagcaggtgaaggtgtggatttccttcct
ttgaccgtagattatcgtgaaaaatttgctgctgctgggcgcttccccggtggtttcttc
aagcgtgaagcacgccccagtgatcaggaaatccttacaatgcgcttggtggatagggta
ttgcgacctctcttccctaaggaatactactgcgaagtacaggtgatgattcagctcatg
tctcatgatgagaacgtgatgcctgatgccttggcgggactcgctgcctctgcttgcttg
gcggtatcggacatccctttcgatggacctatctccgaggtacgcgtagggcgtatcaat
ggggagttcatcatcaacccaagtgcacagcaattggcagaatcggatatggatatcatg
gtcggagcctctaaggagtttgttgccatggtagaaggggaaatggatgaggtatctgaa
aaggatatggccaatgctatccattttgctcatgaagcaattaaggtacagatagaagca
caagagcgtctccgtgagcgtgtagggaaaactatacgaacctatgaggtaccacaggag
aacgaagaagtggctaagaagatctatgatttctgctatgataaatgctatgctattgcc
aaggaaaatacaactaagcatgagcgtagtgacaagttcgacgcagtaaaagaagcttgc
aaagcactcttcagtgaagaagaattggaagaatatgctcctttggtaagtaaatacttc
tctaaagcacaaaaagaagctgtccgtaacctcattctcaacgaggatctccgtttggat
ggtagaaatactaaacaaatacgtcctatatggtgcgaggttggctacttgccttctcct
catggttcggctatctttacccgtggggagacacagtctcttactactgtgaccttggga
acttctcgcgaggccaatgtgatagatattccttccgaacagggagaagaacgtttctac
ttgcattataattttcctcctttttccacaggggaagctcgtccgcttagaggaacttct
cgccgtgaggtaggacatggaaatcttgctcagcgtgcacttaagcgtatgattccagag
gattgcccttatactgtacgtgtggtttctgagatattggagtccaatggttcctcttct
atggctacagtgtgcgcaggtaccttagcccttatggatgcaggtatccagatgaaaaaa
cctgtttcaggaattgccatggggctcatcactgatggcgacaaatacgctgtactttcc
gatatcttgggcgacgaagaccacttgggcgatatggacttcaaggtaacaggaactaag
gatggtatcactgcatgccaaatggatatcaagatcaagggactcacttatgaaatcttg
gaaaaagccttagagcaagcccgtgaaggacgtatgcatatccttggtaaaatcaccgat
actatagccgtgccaaacccaactgtgaagccacatgcgcctaagattgtacgccttgag
atgcctaaggaatacatcggtgctttcattggtactggtggtaagaatatccaagaccta
caagcaagaactaagactactattgtggtagaagaagtgggcgaattaggtattgtagag
atcctcggtaccgatgctgatggtatccaagaagcggtagatgctgtataccatgtatcc
tttgagcctgtagaaggtgaggtgtacaaggtacgtgtagctcgcttggtagagtttggt
gcctttgtagagtttgtcccaggtaaggactcgctcctacatgtatccgaaatcgcatgg
gagcgtgtagagaaaccttcagatgtactcaaagaaggcgatattatcgaagtgaaatac
cttggtatagatcctaagacgaagaaaactcgtgtatctcgcaaggcactccttccacgt
ccggaaaatctcgaaaagagagaaaaacctcattccgataaggaaaaaaaagacaaaccc
cactttaagaaagataaaaaatag
DBGET
integrated database retrieval system
