Capnocytophaga gingivalis: CGC50_07070
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Entry
CGC50_07070 CDS
T05260
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cgh
Capnocytophaga gingivalis
Pathway
cgh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CGC50_07070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgh03021
]
CGC50_07070
03400 DNA repair and recombination proteins [BR:
cgh03400
]
CGC50_07070
Enzymes [BR:
cgh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CGC50_07070
Transcription machinery [BR:
cgh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CGC50_07070
DNA repair and recombination proteins [BR:
cgh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CGC50_07070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RNA_pol_L_2
Fungal_KA1
DUF4249
Motif
Other DBs
NCBI-ProteinID:
ATA86930
UniProt:
A0A250FP96
LinkDB
All DBs
Position
complement(1489886..1490878)
Genome browser
AA seq
330 aa
AA seq
DB search
MALFNFQKPDKVIMIESSEFEGKFEFRPLEPGYGLTIGNALRRVMLSSLEGYAITSVKID
LVEHEFSTITGVVEDVTEIILNLKQVRFKLQTEGTDHEKASISVTGKKQLTAGDFQKFIT
GFQVLNPDLVICNMEPDVAIKMDITIDKGMGYVSAEENTKPNMPMGTIPTDAIFTPIKNV
KYSIENYRVEQKTDYEKLIFEIKTDGSIHPKDALMEAAKTLIHHFMLFSDERITIEPEEV
VQPESYDEESLHMRQLLKTKLIDMDLSVRALNCLKAAEVDTLGDLVSFTKTDLMKFRNFG
KKSLTELDELVESKGLTFGMDLSRYKLEKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcattattcaattttcaaaaaccagataaggttatcatgattgaatcctctgagttt
gagggaaaattcgaatttcgacccctcgaaccaggttatggactcaccatcggtaacgca
ttacgaagagtaatgctctcctccttagagggctacgcaatcacttcggttaaaatagat
ttagtagaacacgaattctctaccatcactggggtggttgaagatgttactgaaatcatt
ttgaacttgaagcaagtgcgtttcaaactgcaaacggaaggtactgaccatgaaaaggct
tctatctctgtaaccggtaagaaacaattgactgcgggtgattttcaaaaatttataaca
ggatttcaagtacttaaccccgatttggttatctgtaatatggaacccgacgtggctatc
aaaatggatatcaccattgataagggtatgggttatgtttccgctgaggaaaataccaaa
cctaatatgcctatgggtaccatccctaccgatgccatctttacacctatcaaaaatgta
aaatacagcatcgaaaactatcgtgtggaacaaaaaaccgactacgaaaagttgattttt
gaaatcaaaacagatggttccatccatcctaaggatgccttgatggaagcggctaagact
cttattcatcacttcatgcttttctccgatgagcgcatcaccattgagcctgaagaggtt
gtgcagcctgaaagctatgacgaagagtctctacatatgcgacagctcctcaagaccaag
cttatagacatggatctttctgttcgagcccttaactgcctcaaagcagctgaagtggat
actttaggggatttggtttctttcactaaaacggacttgatgaagttccgcaacttcggt
aaaaagtctctcactgagctcgatgagctggtagaaagcaaaggactgaccttcggtatg
gatctctcaagatacaaattggagaaagagtaa
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