Capnocytophaga gingivalis: CGC50_11125
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Entry
CGC50_11125 CDS
T05260
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
cgh
Capnocytophaga gingivalis
Brite
KEGG Orthology (KO) [BR:
cgh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cgh01011
]
CGC50_11125
Enzymes [BR:
cgh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CGC50_11125
Peptidoglycan biosynthesis and degradation proteins [BR:
cgh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CGC50_11125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
HTH_28
HTH_23
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
ATA87651
UniProt:
A0A250FRM6
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All DBs
Position
complement(2338672..2340024)
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AA seq
450 aa
AA seq
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MKKIQLLVLLCISSYSGISQVRHSVSDTLKNKRNNTQRVQRGTTQDTLSLSNIREGLLQL
KDDNKALKYDKKWLEELSNQSLYSTMQNDVETPPSNVSYDELPTEVLKERLARLDQKTPF
HIEYNPVLENVIKNFLKNRRASLQRLMNISQYYFPLFERELIKNQVPKEVKYLAIVESAL
NPKATSRMGAKGLWQFMYYTGKMYGLEVNNYVDERSQPELSTQAAAQYLKKLYSVFNDWD
LVLAAYNSGPGNVTKAMRRSGGKTNYWNLRPYLPNETAGYVPAFLATLYIFEYAKEHGFQ
VEKRENVFFETDTIQVKRSISFKDIGDIVGMSEQEIEFFNPAYSLNIVPYIEGKKYGVRL
PVEAIGKFVNNEDVIYAYLDQESSKREKPLPEVVAASQSSSSHKVTHKVKKGETLGRIAS
RYGVSVSQLKKWNRLRSNSVKVGQRLVIRK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatacagctccttgtcctactatgtatctcctcttattcgggaatctcacag
gtaaggcattcagtatctgatactttaaagaacaaaagaaataatactcagagagttcaa
agaggcaccactcaggacactctgtccctgagcaatattcgtgagggacttctccagctt
aaagatgataacaaagccctaaaatacgacaaaaaatggctggaagagctctcgaaccag
tccctatactccaccatgcagaacgatgtggagactccaccatccaatgtctcttatgac
gaactccctactgaagtcctcaaggagcgcttggctcggttagaccaaaaaactcctttt
catatagagtacaaccctgtcttggagaatgttatcaagaactttctaaagaaccgcagg
gcttctctgcaaagactgatgaatatcagccaatactattttcccctcttcgaaagagag
ctaatcaaaaaccaagtacctaaggaagtcaaatacttagccatcgtagaatctgcccta
aaccctaaagcgacttcccgaatgggcgccaaaggtctctggcaattcatgtactataca
ggcaagatgtatggcctggaggtcaataattatgtagatgagcgctctcaaccagaactc
tccacccaagcagcagcgcagtatctcaaaaagctctacagtgtattcaatgactgggac
ttagtccttgccgcttacaactccggaccaggaaatgtcaccaaagcgatgcgccgttct
ggaggaaaaaccaactactggaatctaagaccttacctacctaatgaaaccgctgggtat
gtacccgctttcttggctactctctacattttcgaatatgccaaagaacatggattccaa
gtggaaaaaagagaaaatgtcttcttcgaaactgatacaatacaggtaaaacgctcaatc
tctttcaaggatataggagatatagtgggaatgagcgaacaggaaatagaattcttcaac
cctgcttattcgcttaatatagtcccttatatagaaggaaaaaaatatggcgttcgcctc
cctgtagaagccattggcaagtttgtcaataatgaggatgtgatctatgcctacttagac
caagagtcctccaagcgcgagaaaccactgcctgaggtagtggcggcctcccaatcttcg
tcctctcacaaggttacccacaaggtaaagaaaggagaaactttagggcgcattgcctcc
cgatatggagtctcggtaagccaactcaaaaagtggaaccgactcaggagcaatagtgtg
aaagtaggacaacgccttgtcatacgtaagtaa
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