Capnocytophaga gingivalis: CGC50_12540
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Entry
CGC50_12540 CDS
T05260
Name
(GenBank) peptidoglycan-binding protein LysM
Organism
cgh
Capnocytophaga gingivalis
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysM
LysM_RLK
LysM3_LYK4_5
LysM1_NFP_LYK
ANF_receptor
Peripla_BP_6
mCpol
Motif
Other DBs
NCBI-ProteinID:
ATA87883
UniProt:
A0A250FS20
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Position
2616813..2618732
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AA seq
639 aa
AA seq
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MRKILLFLCVLTGFSLWAQPKQHNSYTVKEGDTLESIAKVFRVSPSDIKSLNPTLEKGLQ
KGMLLIIPGDEISYFNKKQPTGFEKYTVKDKETLYGLAQRFHITQDDLRRYNMVLYKKEL
RKGQEITIPLYRDAPKEISKGKEGLTKYIVKPGEGLWRIAQNYGVTQETLERLNPNLPNP
LKEGMEIWVPAGKSGVPEVTTDKALVLYQVEKGEGFMSLERKFGLSQKELEKLNPELKDG
IKLEAQIWIPKNNFLDYVATLGGASQTDVATGNATDANPKIKSGMNPSNIKTVSFVLPFR
VNGIQAGNIADIKIKLQKEKITAIASDFYSGALMALDSLQKMGFSLTVNVYDSNGNAQGV
KAISSSEGLKSSQVIIGPFSPSAFNALSETITSDNIAILAPLSNRNIELRPNVFQTVPTI
EVQQNSMISFINQKYPDANIVLLSDAKSKDMNEKLLSSFSQAKNVDNIQGIQSALNKEAT
NIVFVSSDDVVFLSDAIRILYNIAGINGKNKNYNIIMATLDKGDAYDHNSISNSQLSALK
FTYPAANRYAGESNPFIKKYLKTYKISPSKYAFRGFDLTMDAVLRTSLVGNFIKEANIGE
TSYQENKFQYVKNAAKGGGYENRAVYILRYEDLQISEIY
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaatactattatttttgtgtgtacttacaggatttagcctatgggcacaacct
aaacaacacaatagctatacagtaaaagagggagatactcttgagagtatagccaaggta
ttccgtgtatcccccagtgatataaagtccctaaaccccactttggaaaaaggcttacag
aaaggaatgctgcttatcatacctggagatgaaataagctactttaataaaaagcaacct
actggttttgagaagtatacagtaaaagacaaagaaacactttatggactggcgcagagg
ttccatattacacaagatgacctacgtcgctacaatatggtattgtacaagaaagagttg
cgcaaaggacaggaaattacgattcctctttaccgagatgcccctaaagaaatatccaaa
ggcaaggaaggacttaccaaatatatcgtaaagccaggagaaggcttatggcgtatagct
cagaactatggagtaactcaagaaaccctagaacgactcaaccccaacctgcccaatccg
ctaaaagaagggatggaaatatgggtacctgcagggaaatcaggtgttccagaagtgact
acagacaaggctttggtactttatcaagtagagaaaggggaagggtttatgagcttagaa
cgcaagtttggcctttcacagaaagagctggaaaagctcaatccggagctcaaagacgga
atcaagttagaagcccagatctggatacctaagaacaatttcttagactatgtagctaca
ttaggaggagcctcccaaacagatgtagccacaggcaatgccactgatgcaaatcctaag
ataaaatccggcatgaatccctccaatatcaagacagtttccttcgtattgccatttaga
gtcaatggaatacaggcggggaatatagctgatattaagatcaaattgcagaaagaaaaa
ataacagccatagcctcagatttctattcaggagctctaatggccttggattctctgcag
aaaatgggattctcccttacggtgaatgtgtatgatagcaatgggaatgctcaaggagtg
aaagccatatcctccagtgaaggtctgaagagctcacaagtgattataggtcccttttct
ccttcagccttcaatgctctatcggagacaatcacctccgacaatattgctatattggca
cctctttccaacagaaatatagaactccgtcccaatgtattccagacagtccctacaata
gaggtacaacagaatagcatgataagctttatcaatcagaaatatccagatgccaatatt
gtattactatccgatgccaagagtaaggatatgaatgaaaaactattatcctctttttct
caggctaaaaatgtagataatatacaaggtatacaaagtgcattgaacaaagaggcgaca
aatatagtttttgtatcatcagatgatgtggtattcctctctgatgcgatacgtatacta
tacaacatagctggaatcaatgggaagaataagaactataatattattatggctactttg
gataagggagatgcttatgaccacaatagtatatccaatagccagctatcagcactgaaa
ttcacctatccagcagccaatagatatgcaggtgagagcaatccttttataaagaaatac
ctcaagacctataaaatatcgcctagcaaatatgcctttagaggatttgatctcacgatg
gatgcagtattgcgaactagtttggtagggaattttatcaaagaagccaatataggagaa
acctcctatcaggagaacaaattccaatatgtaaagaatgcagcaaagggaggaggatat
gagaatagagcagtttacatactgcgttatgaggatttgcaaataagtgaaatttattag
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