Capnocytophaga gingivalis: CGC50_13535
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Entry
CGC50_13535 CDS
T05260
Symbol
groL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cgh
Capnocytophaga gingivalis
Pathway
cgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGC50_13535 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgh03019
]
CGC50_13535 (groL)
03110 Chaperones and folding catalysts [BR:
cgh03110
]
CGC50_13535 (groL)
03029 Mitochondrial biogenesis [BR:
cgh03029
]
CGC50_13535 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgh04147
]
CGC50_13535 (groL)
Enzymes [BR:
cgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CGC50_13535 (groL)
Messenger RNA biogenesis [BR:
cgh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CGC50_13535 (groL)
Chaperones and folding catalysts [BR:
cgh03110
]
Heat shock proteins
HSP60 / Chaperonin
CGC50_13535 (groL)
Mitochondrial biogenesis [BR:
cgh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CGC50_13535 (groL)
Exosome [BR:
cgh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CGC50_13535 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CGC50_13535 (groL)
Exosomal proteins of breast cancer cells
CGC50_13535 (groL)
Exosomal proteins of colorectal cancer cells
CGC50_13535 (groL)
Exosomal proteins of bladder cancer cells
CGC50_13535 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
ATA88070
UniProt:
A0A250FSG0
LinkDB
All DBs
Position
complement(2822553..2824181)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKDIKFDIDARDGLKKGVDALANAVKVTLGPKGRNVIISKSFGAPTVTKDGVTVAKEVE
LPDALENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGID
KSVKAIVNELAKQSQKVGDSIDKIRQVAAISANNDEAVGELIADAFKKVGKEGVITVEEA
KGTDTYVDIVEGMQFDRGYLSPYFVTNSEKMIAELDNPFILLYDKKISTMKDLLPILEPV
AQSGKSLLIIAEDIDGEALATLVVNKLRGALRIAAVKAPGFGDRRKAMLEDIAILTGGTV
IAEERGFTLENATVDMLGRAERVAIDKDNTTIVNGAGKSEEIQARVGQIKAQIEVTTSDY
DKEKLQERLAKLAGGVAVLYVGAPSEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL
RARNVLHKIKTENSDEVTGIQIVYRAVEAPLRTIVENAGGEGSVVIAKVLESRNSFGYNA
KTEKYVDMFRAGIIDPKKVTRVALENAASVAGMILTTECSLVDIKEDTPAMPPMGGGMPG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatattgatgcacgtgatggcttaaaaaaaggagtagat
gctctagccaatgctgtaaaagtaactcttggtcctaaaggacgtaatgttattattagc
aaatccttcggtgctcctaccgttaccaaagatggagttactgtagctaaggaagtagaa
cttcctgatgctcttgagaatatgggagcacaaatggttaaggaagtagcttccaaaacc
aatgacctagctggagatggtactactactgctactgtacttgcacaagctattgtacgt
gaaggacttaaaaacgtagctgcaggtgccaatcctatggatctaaagcgtggtattgat
aagtctgtaaaagctatcgtaaatgaattggccaaacaaagccaaaaagtaggagattct
attgacaaaattcgtcaggtagcagctatctctgccaataatgacgaagcagtaggagaa
cttatcgccgatgctttcaaaaaagtaggcaaagaaggagtgatcactgtagaagaagct
aaaggtaccgatacttatgtagatatcgtagaaggtatgcagttcgaccgtggttatctt
tccccttactttgtaaccaactcagaaaaaatgattgctgagcttgataatccttttatc
cttctatatgataagaagatttcaactatgaaggacttgcttcctatcttggaacctgta
gctcagtctggtaaatcacttttaatcatcgctgaagacattgatggagaagctttggca
acccttgtggttaacaaattgcgtggtgccttacgtatcgctgctgtaaaagctcctggc
tttggtgatcgccgcaaagcaatgcttgaggatattgccatccttaccggaggtactgtt
atcgctgaagaaagaggctttactcttgaaaatgcaactgtagatatgctcggtcgtgcc
gaacgtgtagctatagacaaggacaatactacaattgtaaacggagctggtaagagcgaa
gaaattcaagcacgtgtaggacaaatcaaagctcagatagaagtaactacttctgattat
gacaaagaaaaacttcaagaacgcttggctaagttggccggtggggtagctgttctctat
gtaggagctccttctgaagtggaaatgaaagaaaagaaagaccgtgtagatgatgcccta
catgctactcgtgctgctgtagaagaaggtattgttgcaggtggtggggttgctctcctc
cgtgcaagaaatgtacttcataaaatcaaaactgaaaacagtgatgaagttactggtatc
caaatcgtataccgtgcagtggaagcccctctacgtactatcgtagaaaatgctggtggt
gaaggttctgtagtgattgccaaagtattggaaagcagaaattcttttggatacaacgcc
aaaacagaaaaatacgtagatatgttccgtgcaggtatcattgaccctaaaaaggtaact
cgtgtagctttggaaaatgctgcttctgtagctggtatgatccttaccactgagtgctct
ttagtagatatcaaagaagatactcctgctatgcctcctatgggtggaggaatgcccgga
atgatgtaa
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