Cryptococcus gattii: CGB_A1550C
Help
Entry
CGB_A1550C CDS
T02232
Name
(RefSeq) subunit of DNA Replication factor C (RF-C); Rfc5p
KO
K10756
replication factor C subunit 3/5
Organism
cgi
Cryptococcus gattii
Pathway
cgi03030
DNA replication
cgi03410
Base excision repair
cgi03420
Nucleotide excision repair
cgi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGB_A1550C
03410 Base excision repair
CGB_A1550C
03420 Nucleotide excision repair
CGB_A1550C
03430 Mismatch repair
CGB_A1550C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgi03032
]
CGB_A1550C
03036 Chromosome and associated proteins [BR:
cgi03036
]
CGB_A1550C
03400 DNA repair and recombination proteins [BR:
cgi03400
]
CGB_A1550C
DNA replication proteins [BR:
cgi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CGB_A1550C
DNA Replication Termination Factors
ELG1-RFC complex
CGB_A1550C
Chromosome and associated proteins [BR:
cgi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CGB_A1550C
DNA repair and recombination proteins [BR:
cgi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CGB_A1550C
Check point factors
HRAD17(Rad24)-RFC complex
CGB_A1550C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
AAA_22
AAA_11
DUF3802
AAA_assoc_2
Motif
Other DBs
NCBI-GeneID:
10188434
NCBI-ProteinID:
XP_003191220
UniProt:
E6QZ86
LinkDB
All DBs
Position
A:complement(join(322153..322180,322235..322323,322377..322451,322501..322806,322864..323045,323099..323291,323348..323398,323449..323508,323560..323625,323674..323694))
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPRTLDDLHYHDGLSSRLKSLAASGDFPHILFYGPSGAGKKTRIMCTLRELY
GPGVEKLRIDQRVFVTPSNRKLDVNVVQSNYHIELTPSDVGMYDRVVIQDILKEIAQTQQ
VDLNAKQRFKVVIINEADALTRDAQAALRRTMEKYMANMRLILCANSTSKIIAPIRSRCL
LMRVAAPTDDEMTTVLNYVAKKERFTLPSPANNAILETSQGNLRKALLVFEAMRMQRPDL
SGDIEVAKPDWETYCGKVADAILQEQTAQRLLEIRAKIYELLSHCIPPTVVMKTISERLV
EKVDDTLKPQIVHWTAYYELRMRMGSKKIFHIEAFIVKVMTVYKQYTLMGFTEDFE
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtctctctgggtcgacaagtatcgtccacgaacgctcgacgatctccactatcacgat
ggcctctcatcgcgtttgaaatccttggctgcttctggagactttcctcacatcctcttc
tatggaccgtcaggtgctggcaagaagacaaggatcatgtgcactcttcgagaactttat
ggacctggcgtagagaagctccgaattgaccaaagagtctttgtgaccccttccaatcgc
aagcttgacgtcaacgtcgttcagtcaaactatcacatcgagctcacaccatccgatgtg
ggaatgtacgacagagtggtcatccaagatatcttgaaggagattgcacagactcaacaa
gttgatttgaatgccaaacagaggttcaaagtggtcatcatcaacgaggcagatgctctt
actcgagacgctcaagcagcattacgacgaaccatggaaaaatacatggccaatatgaga
ctcatcctctgtgccaacagcacaagcaagatcattgctcctattagaagtcggtgttta
cttatgcgagtggctgcccctacagatgacgaaatgacaacagtcctcaattacgtcgcc
aagaaagaacgattcaccctcccctcccctgccaacaacgccatcctcgaaacatcccaa
ggcaatcttcgaaaggctctacttgtttttgaggccatgcggatgcaacgtcctgacctg
tctggtgacatcgaggtcgccaagcccgattgggagacatattgtggcaaggtcgcggat
gcgatcttgcaggagcaaactgcgcaaagactgttagaaatccgggcaaagatctacgag
ttgttaagccactgtataccgccaacggtcgttatgaagaccatctcagaaagactagtt
gagaaggttgatgacacattaaaaccacaaattgtgcactggaccgcttactacgaactc
cgaatgcgaatgggatcaaaaaagatattccacatcgaggcatttattgtcaaggtgatg
actgtttacaagcaatatacacttatgggattcaccgaagactttgaataa
DBGET
integrated database retrieval system
