Cryptococcus gattii: CGB_A1680C
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Entry
CGB_A1680C CDS
T02232
Name
(RefSeq) nucleic acid binding protein
KO
K12879
THO complex subunit 2
Organism
cgi
Cryptococcus gattii
Pathway
cgi03013
Nucleocytoplasmic transport
cgi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CGB_A1680C
09122 Translation
03013 Nucleocytoplasmic transport
CGB_A1680C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgi03019
]
CGB_A1680C
03041 Spliceosome [BR:
cgi03041
]
CGB_A1680C
Messenger RNA biogenesis [BR:
cgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CGB_A1680C
Spliceosome [BR:
cgi03041
]
Complex C
Other components
EJC/TREX
CGB_A1680C
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CGB_A1680C
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
Motif
Other DBs
NCBI-GeneID:
10188350
NCBI-ProteinID:
XP_003191213
UniProt:
E6QZ99
LinkDB
All DBs
Position
A:complement(join(352276..352418,352474..354178,354232..354295,354346..354533,354585..355042,355093..355882,355939..356405,356453..357686,357731..357826,357881..358453,358502..358966))
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AA seq
2060 aa
AA seq
DB search
MPSRRSTVKSKVQSVTASSHPLSEFITPSLNEQLLDFILQWETTGTESLHGLIISLLNTI
ASAPTTLGVVPLLHVLVTLLKSNVDERELTGVFEGVLDELEDERRDIFGEALVDAVEVLE
EEQEDMGENKDKEEKETEKAEDKSPKGLSILKLLLESNTLPSYIPNLLLNPERLIPLNLH
PIPRNPRALQSALVKKNTTLFFKQRKFNLLRECSEGFSGLIVLLTSEDTLPSHPEEEDDE
ERRERAERVWGKIMRLIGYFNLSPPRVLDIILEVFSCHITHHWSFFLELLRCSPWRPSSN
QEDGDGESSTEKGWKEEEVEGIENALKRDGDRVLSQVLGFKFGFFRKPEAGDTPICLIFT
AALLIKHGFVSLTDLLPCLSPDDNEMETIRKQWALSLSSRSGPANALTNTILDDDEPPSG
ATASSMEQAQNIPTKPPPEQRIQLTQALLALGDKASSEYMLARWPWIAQKNIGVADLILD
IVEDAIKPIYEEVAAKEEEEFDLQAISPVVQELESIEKQTVLTLFAPTPPETTTKRFKFF
YPHGEGVSESWSSVEEIHEKGLRWLGLIRGLGGRRARLMVMLSRIGAAQFERLRKDKVEQ
GLAAEHLQPTMEELKPWLDIIRVSLLPSLSCSSASGTFDVELWSLLKLFPYTSRYTLYGE
WRDSTCSANGKNPCLIATHAAAMTTKEVQKALRRVTSTNTSATSGATPTERHSARALAKQ
SHHNPVFVWTTAVTQVKAYPNIGEAIVDAGRYMAQLSFDVATFVMLDTLADNRALRLNEM
GTGVALWLERLSKFVGDFNRRYSNMDLYPVLQYIINRLMRGHSGDLIILEKLMSSMSGIE
PVPNDGVSEAQLLAYAGGREMIREAFSATRIIVTAPPEPGASDQPVRAPMEKVKNVKKSL
PRLVNALREKELAMPIWIALAQTRQAVVDKMVNAPIKAMNLVQDTCHNAFVQFGDFLVDY
LTSDEHIALTPDLQQLIVDFGLEYGMAFQILRPRLNAEIERARVEEKVAVQARLEAAKKA
MSEKERTESPQKIESPALPGSPMTPSLQITPGATPGPGEIEDVVMEESEKEALSVPATKT
PSGKGKMWWPSALTPTMQQTRKLLPREANEVMSAPFFVIFWHLTTPDIAFSPQSYDNAIK
SINRHISTISSWRVNPRDKTKVAEQRDELTRLKARVKVLQEEKETHGSLVNGPMKRRMRL
ESGKWFGKAIVEKNLQRPLAIQLHQYCFYPRAVLSPCDAVFVAKFIRMAHDLGTAGFSTL
FVYNNFFNDNLAACIFSCTDSEARNLGRCLALILADLDKWHQSENVYLKEALGISPKPTE
GGEQKRLPGMLFRSRAGDDMREMSWQEFRNFYAKCHNVLTRALISCWSEAEFMHNKNAII
VALQVIKYFPLMETNGKAIETAVKKLQAGEVGEIPNDLKMMCTSFLSGLKKRQDARPFVA
PATFHGAAARAAVARAPSAPKGESPAPSATISTPSRPQPANGANDTASPSPAGTPRAMTT
DPRTLRQKVEESRARAAASAAAKEQEAGTAPQSPLVHPIPTRPGLPSRLASSANSVPVTP
TGPSAVTRTSTPNATSVNSGAHTPASSMGPPPDMSVDEARAAARARRLGGIHRPPPSLPS
AVAQTVQNAASTSPTNLDVGKQEEKVEEKEKEKEPGTPPSPVVESTRGKSPPASVKVSPT
TTVRTHREGSVESRASERSKRREQDRDRYRRDRDHRDREKERDRRDRSTAEDDKKRQEDS
VPASTQSDAGRESRRSRRDGERERDKEEKKSRERDREDRKERGRDRSYRGEDSDRKRKRD
EEPSSRKLEPEASNGGRKERERERRRYDERDRERERDSRDRERDRERDRNERDRDGHRDR
RERERDGRRRDRDSRDVRDTRERHRTPPAEDRPDLAPAAPKDSTDTTPNAFGPGVARTPH
ALPARPGNSEQVPKPPPNAAPVSQTPQEPLNLAARMGIMTRSASPHVRANEPIQRSTRDD
LRRDNDWSNAPRREEARMEEARKEPIDRKRALEAEAGSEAREESPGASKRVKIDRDKARG
RRQEGGAKMFQQAMGGTKDK
NT seq
6183 nt
NT seq
+upstream
nt +downstream
nt
atgccttcccgtcgaagtacggtcaagtcaaaggttcaatccgtgacagcctcctctcac
cctctctccgaattcatcacaccctctctcaatgagcagctgttggacttcattttgcaa
tgggaaacaacgggtaccgagtcccttcacggacttattatatcgctcctcaatactatt
gcttcggcgcctaccacacttggcgttgtgccattactacacgtgcttgtgacgcttctc
aaatccaatgtggatgaaagagagctcactggtgtgttcgaaggtgttttagatgagctt
gaagatgaaagaagggatatcttcggtgaagcactggtggatgctgtagaagtgttggaa
gaggagcaagaggacatgggcgaaaacaaagacaaagaagagaaggagactgagaaggca
gaagacaagtctccaaaaggactttcaatcctcaaacttctccttgagtcaaatactctt
ccttcatatatccccaatctcctcctgaacccagaacgtctcatccctctcaatcttcac
cctattccccgaaaccctcgagccttacaaagcgctttggtcaagaaaaacacgactctt
tttttcaagcaacgaaaattcaatcttttacgtgaatgttccgaaggtttctccggactg
atcgtgcttttaacttcagaggacactcttccatctcatccagaggaagaggatgatgaa
gaacgaagagagagggcagaaagggtctggggaaagattatgcgattgataggatacttc
aacctctcaccgccaagagtgttggatatcatcctcgaagtattcagctgccacattaca
catcactggtccttcttccttgagctcttgaggtgctcgccatggagaccaagctctaac
caggaggatggtgatggcgaaagctcaacagaaaagggctggaaagaggaagaagttgaa
ggaatcgagaatgctttgaagcgggacggggatagagttctgagtcaagttttggggttt
aagtttgggttcttccgaaaacctgaggctggcgacacacctatctgtctcattttcact
gctgctctccttatcaagcacggctttgtcagcttgacggaccttttgccatgtctttct
cctgatgacaacgagatggaaacaatacgcaagcaatgggcgttatctctttcatcacga
tctggccccgccaatgctctgaccaataccattcttgacgatgatgaaccaccctctggc
gccactgcgtcttctatggaacaagcccaaaatatcccgacaaagcctcctcccgagcaa
aggatacagcttactcaagcacttctcgcattgggcgacaaggcttcgtcagagtacatg
ttggcaaggtggccatggatcgcgcagaagaatataggagtagcagatttaatcttggac
atcgtggaagatgccataaaaccgatctacgaagaagttgcggccaaggaggaagaagaa
tttgacttgcaggctatctctcctgtagtgcaagagttagaatcaatcgagaagcagact
gtcttgactctgtttgcccccacaccccccgaaacgacaaccaagagattcaaattcttc
tatccccatggtgagggcgtttcagaaagctggtcatctgtggaagagattcacgagaag
ggcttgaggtggctgggtttgattaggggacttggaggaagaagagcgaggctcatggtc
atgcttagcagaattggagctgcgcagtttgaacggctccgaaaggacaaggtggagcag
ggactagcagcagagcatttgcagccgacgatggaggagctcaaaccctggcttgacatc
atccgtgtctcccttcttccttctctgtcctgttcttctgcctcagggacgttcgatgtc
gaactctggtcccttcttaaactcttcccctacacctcacgatacactctctatggcgaa
tggcgagatagcacttgcagtgcaaatggcaagaatccttgtctaatagcaactcacgcc
gcagcgatgactaccaaagaagttcaaaaggcccttcgacgagtcacttcaaccaacacc
tctgctacatccggtgcgactcctaccgaacgacatagtgctcgagcgctcgccaaacaa
agtcaccataatcctgtgtttgtctggacaactgcagtgacacaagtgaaagcgtaccca
aacatcggagaggctatcgtagatgcaggaaggtatatggctcaactgtcgtttgacgta
gccacgtttgtcatgttagatactttggcggacaacagggctttgaggctgaatgagatg
ggtaccggtgttgcgctctggttggaacgactgtccaaatttgttggagatttcaacaga
cgatacagcaacatggatctttatcccgttttgcaatacatcatcaatcgacttatgcgt
ggccactctggtgatctcatcatccttgaaaaactaatgtcttccatgtcaggcattgag
ccggtccctaacgatggtgtttctgaggcccagcttctagcatatgctggaggccgcgaa
atgatacgcgaggccttctcagccactcgaattatcgtaactgcccctccagaacctggt
gcatcggatcaacccgtgcgagcgcctatggagaaagtgaaaaatgtgaagaagagtttg
ccgaggttggtcaatgcattgagggaaaaggagttggcaatgcctatctggatagctttg
gcgcagacaagacaggcggtagtggacaagatggtaaatgcacctatcaaggccatgaac
cttgtccaggatacttgccacaacgcattcgtccagttcggcgatttcctcgttgactac
cttacttctgacgagcatatcgctcttactcccgatcttcagcaacttatagttgatttt
gggctcgagtatggcatggccttccagatcttgcgaccacgtctaaatgcggagattgaa
cgtgcacgtgtcgaggagaaagtcgccgtacaggcgcggcttgaagccgcgaagaaggca
atgtctgagaaagagaggaccgaatcacctcaaaaaattgagagccccgcgcttcccgga
tcgcccatgacgccgtctttgcagatcactccaggtgctactccgggaccaggagaaatt
gaggatgtcgtaatggaggagagtgaaaaggaggcacttagtgtacctgcaactaaaacg
ccgagcggtaaaggcaagatgtggtggccctctgctttgacgcctaccatgcaacaaaca
cgaaaacttctaccacgtgaagctaatgaggttatgagtgcgcctttctttgtcattttc
tggcatcttacgacccccgacatcgctttctcccctcaatcgtacgataacgcgataaag
tctatcaatcgacatatctccaccatctcctcttggagggtaaacccaagggataaaaca
aaggtggcagagcagcgggatgagttgactagactgaaagcgagggtgaaggttctgcaa
gaggaaaaagaaacacacggatcgctggtcaacggaccaatgaagagaaggatgaggctg
gagagtggcaagtggtttggcaaagccattgtggagaagaaccttcaaaggccgttagct
attcagcttcatcaatattgtttctaccctcgagctgttctttcgccctgcgacgccgtc
ttcgtcgccaagtttatccgtatggctcatgacttaggtacagccggcttctcgactttg
tttgtttacaacaatttcttcaatgataacctcgccgcctgtatcttctcctgtacagat
agtgaagctcgtaatcttggtcgatgcctggctttgattcttgccgatttggataagtgg
catcagagcgaaaacgtgtacctcaaggaagcgctcggcatctcacctaaacccaccgag
ggtggggaacaaaagaggctacctggtatgctctttaggtcaagggccggtgatgatatg
cgtgaaatgtcgtggcaagaattcagaaacttctacgccaagtgtcataacgtcctcacg
agggctctcatttcatgttggagcgaagcagaattcatgcataacaagaatgctatcatt
gtcgccttgcaagtaatcaaatatttcccactcatggagacaaatggcaaagcaatcgag
acagcggtgaagaagctgcaagccggtgaggttggcgagatccctaatgatttgaagatg
atgtgcacttccttcttatcgggtctgaagaaacgtcaagacgcaagaccattcgttgct
cctgcgacattccacggcgccgccgctcgtgctgctgttgcaagggcaccaagcgcccct
aaaggcgaatctccagctcccagcgccaccatatcaactccctctcggccccaaccagct
aacggtgcaaatgatacagcatcgccttctccagccggtactccgagagccatgactacc
gatcccagaactttgcgtcaaaaggtcgaagaaagtcgagccagggcggcggcttcggca
gccgctaaggaacaggaagctggcactgctccgcagtctcctcttgtgcaccccatcccc
actcgacccggtctgccctctcgtcttgctagttctgctaactcggtccctgtgactcca
actgggccctcggccgttactcgaacttctacgcctaatgcaacctctgtgaactctggt
gctcacacgcctgcctcttctatgggtccacctcccgatatgtctgtggatgaagcccga
gctgctgcacgtgcccgcagactcggcggtattcatcgcccccctccatctctaccgtct
gctgtagcacagactgtacagaatgcggcatctacttcccccacgaacttggatgttggg
aaacaggaggaaaaagtggaagagaaagagaaagagaaagagcccggtactccacctagt
cccgttgtggagtctactcgtggcaaatctccaccagcctccgttaaggtatcgcctaca
actactgtgaggactcacagggagggcagcgtcgaaagccgggcgagcgagaggtcgaag
aggcgcgagcaagacagagataggtaccgtcgtgacagagatcacagggatagggaaaaa
gagagggatcgacgggatcgatctactgcagaagatgacaagaagcgccaggaagatagc
gttccagcgtccactcaaagtgacgccgggcgcgaatccaggagatccaggcgtgatgga
gagcgagaaagagataaggaggagaagaagagtcgagagcgagacagggaagacagaaag
gaaagaggcagggataggtcttaccgaggcgaagacagtgatcgcaagcgcaagagggat
gaggagccttcgtcgaggaaactcgagccagaagcgtcaaatggcggtaggaaagagcgt
gaacgcgagcggagaagatacgatgaacgggatagggaaagggaacgcgattccagagat
cgggagagggaccgagaaagggatagaaacgagcgagacagggatggccatcgtgataga
cgcgaacgtgagcgggatggtcggcgacgagaccgagacagccgcgatgtccgagacacc
cgtgagcgacatcgtacacctcctgctgaagaccgtcccgatcttgcacccgctgccccc
aaagacagtactgatactacgcccaacgctttcggccccggggttgcgagaacacctcat
gcccttccggcaaggcctggcaattctgagcaggttcccaaaccacctccgaacgctgct
ccagtatcccaaaccccccaagaacctctcaatctggctgctagaatgggcatcatgaca
cggtcggcttctcctcatgtaagggctaatgagcccatccaaagatctacgagagatgac
cttcggagggataatgattggagtaatgcgccgaggagagaagaagccagaatggaggaa
gcgaggaaagagcctattgatcggaaacgagctttagaagctgaggctggctccgaggct
cgagaggagtcccctggagcatccaaacgtgtcaagattgatcgtgacaaggcccgtgga
cgaaggcaagagggcggcgcgaaaatgttccaacaagctatggggggtacaaaggacaaa
tag
DBGET
integrated database retrieval system
