| Entry |
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| Name |
(RefSeq) nucleic acid binding protein
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| KO |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cgi00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CGB_A1680C
09122 Translation
03013 Nucleocytoplasmic transport
CGB_A1680C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cgi03019]
CGB_A1680C
03041 Spliceosome [BR:cgi03041]
CGB_A1680C
Messenger RNA biogenesis [BR:cgi03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CGB_A1680C
Spliceosome [BR:cgi03041]
Complex C
Other components
EJC/TREX
CGB_A1680C
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CGB_A1680C
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
A:complement(join(352276..352418,352474..354178,354232..354295,354346..354533,354585..355042,355093..355882,355939..356405,356453..357686,357731..357826,357881..358453,358502..358966))
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| AA seq |
2060 aa
MPSRRSTVKSKVQSVTASSHPLSEFITPSLNEQLLDFILQWETTGTESLHGLIISLLNTI
ASAPTTLGVVPLLHVLVTLLKSNVDERELTGVFEGVLDELEDERRDIFGEALVDAVEVLE
EEQEDMGENKDKEEKETEKAEDKSPKGLSILKLLLESNTLPSYIPNLLLNPERLIPLNLH
PIPRNPRALQSALVKKNTTLFFKQRKFNLLRECSEGFSGLIVLLTSEDTLPSHPEEEDDE
ERRERAERVWGKIMRLIGYFNLSPPRVLDIILEVFSCHITHHWSFFLELLRCSPWRPSSN
QEDGDGESSTEKGWKEEEVEGIENALKRDGDRVLSQVLGFKFGFFRKPEAGDTPICLIFT
AALLIKHGFVSLTDLLPCLSPDDNEMETIRKQWALSLSSRSGPANALTNTILDDDEPPSG
ATASSMEQAQNIPTKPPPEQRIQLTQALLALGDKASSEYMLARWPWIAQKNIGVADLILD
IVEDAIKPIYEEVAAKEEEEFDLQAISPVVQELESIEKQTVLTLFAPTPPETTTKRFKFF
YPHGEGVSESWSSVEEIHEKGLRWLGLIRGLGGRRARLMVMLSRIGAAQFERLRKDKVEQ
GLAAEHLQPTMEELKPWLDIIRVSLLPSLSCSSASGTFDVELWSLLKLFPYTSRYTLYGE
WRDSTCSANGKNPCLIATHAAAMTTKEVQKALRRVTSTNTSATSGATPTERHSARALAKQ
SHHNPVFVWTTAVTQVKAYPNIGEAIVDAGRYMAQLSFDVATFVMLDTLADNRALRLNEM
GTGVALWLERLSKFVGDFNRRYSNMDLYPVLQYIINRLMRGHSGDLIILEKLMSSMSGIE
PVPNDGVSEAQLLAYAGGREMIREAFSATRIIVTAPPEPGASDQPVRAPMEKVKNVKKSL
PRLVNALREKELAMPIWIALAQTRQAVVDKMVNAPIKAMNLVQDTCHNAFVQFGDFLVDY
LTSDEHIALTPDLQQLIVDFGLEYGMAFQILRPRLNAEIERARVEEKVAVQARLEAAKKA
MSEKERTESPQKIESPALPGSPMTPSLQITPGATPGPGEIEDVVMEESEKEALSVPATKT
PSGKGKMWWPSALTPTMQQTRKLLPREANEVMSAPFFVIFWHLTTPDIAFSPQSYDNAIK
SINRHISTISSWRVNPRDKTKVAEQRDELTRLKARVKVLQEEKETHGSLVNGPMKRRMRL
ESGKWFGKAIVEKNLQRPLAIQLHQYCFYPRAVLSPCDAVFVAKFIRMAHDLGTAGFSTL
FVYNNFFNDNLAACIFSCTDSEARNLGRCLALILADLDKWHQSENVYLKEALGISPKPTE
GGEQKRLPGMLFRSRAGDDMREMSWQEFRNFYAKCHNVLTRALISCWSEAEFMHNKNAII
VALQVIKYFPLMETNGKAIETAVKKLQAGEVGEIPNDLKMMCTSFLSGLKKRQDARPFVA
PATFHGAAARAAVARAPSAPKGESPAPSATISTPSRPQPANGANDTASPSPAGTPRAMTT
DPRTLRQKVEESRARAAASAAAKEQEAGTAPQSPLVHPIPTRPGLPSRLASSANSVPVTP
TGPSAVTRTSTPNATSVNSGAHTPASSMGPPPDMSVDEARAAARARRLGGIHRPPPSLPS
AVAQTVQNAASTSPTNLDVGKQEEKVEEKEKEKEPGTPPSPVVESTRGKSPPASVKVSPT
TTVRTHREGSVESRASERSKRREQDRDRYRRDRDHRDREKERDRRDRSTAEDDKKRQEDS
VPASTQSDAGRESRRSRRDGERERDKEEKKSRERDREDRKERGRDRSYRGEDSDRKRKRD
EEPSSRKLEPEASNGGRKERERERRRYDERDRERERDSRDRERDRERDRNERDRDGHRDR
RERERDGRRRDRDSRDVRDTRERHRTPPAEDRPDLAPAAPKDSTDTTPNAFGPGVARTPH
ALPARPGNSEQVPKPPPNAAPVSQTPQEPLNLAARMGIMTRSASPHVRANEPIQRSTRDD
LRRDNDWSNAPRREEARMEEARKEPIDRKRALEAEAGSEAREESPGASKRVKIDRDKARG
RRQEGGAKMFQQAMGGTKDK |
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| NT seq |
6183 nt +upstreamnt +downstreamnt
atgccttcccgtcgaagtacggtcaagtcaaaggttcaatccgtgacagcctcctctcac
cctctctccgaattcatcacaccctctctcaatgagcagctgttggacttcattttgcaa
tgggaaacaacgggtaccgagtcccttcacggacttattatatcgctcctcaatactatt
gcttcggcgcctaccacacttggcgttgtgccattactacacgtgcttgtgacgcttctc
aaatccaatgtggatgaaagagagctcactggtgtgttcgaaggtgttttagatgagctt
gaagatgaaagaagggatatcttcggtgaagcactggtggatgctgtagaagtgttggaa
gaggagcaagaggacatgggcgaaaacaaagacaaagaagagaaggagactgagaaggca
gaagacaagtctccaaaaggactttcaatcctcaaacttctccttgagtcaaatactctt
ccttcatatatccccaatctcctcctgaacccagaacgtctcatccctctcaatcttcac
cctattccccgaaaccctcgagccttacaaagcgctttggtcaagaaaaacacgactctt
tttttcaagcaacgaaaattcaatcttttacgtgaatgttccgaaggtttctccggactg
atcgtgcttttaacttcagaggacactcttccatctcatccagaggaagaggatgatgaa
gaacgaagagagagggcagaaagggtctggggaaagattatgcgattgataggatacttc
aacctctcaccgccaagagtgttggatatcatcctcgaagtattcagctgccacattaca
catcactggtccttcttccttgagctcttgaggtgctcgccatggagaccaagctctaac
caggaggatggtgatggcgaaagctcaacagaaaagggctggaaagaggaagaagttgaa
ggaatcgagaatgctttgaagcgggacggggatagagttctgagtcaagttttggggttt
aagtttgggttcttccgaaaacctgaggctggcgacacacctatctgtctcattttcact
gctgctctccttatcaagcacggctttgtcagcttgacggaccttttgccatgtctttct
cctgatgacaacgagatggaaacaatacgcaagcaatgggcgttatctctttcatcacga
tctggccccgccaatgctctgaccaataccattcttgacgatgatgaaccaccctctggc
gccactgcgtcttctatggaacaagcccaaaatatcccgacaaagcctcctcccgagcaa
aggatacagcttactcaagcacttctcgcattgggcgacaaggcttcgtcagagtacatg
ttggcaaggtggccatggatcgcgcagaagaatataggagtagcagatttaatcttggac
atcgtggaagatgccataaaaccgatctacgaagaagttgcggccaaggaggaagaagaa
tttgacttgcaggctatctctcctgtagtgcaagagttagaatcaatcgagaagcagact
gtcttgactctgtttgcccccacaccccccgaaacgacaaccaagagattcaaattcttc
tatccccatggtgagggcgtttcagaaagctggtcatctgtggaagagattcacgagaag
ggcttgaggtggctgggtttgattaggggacttggaggaagaagagcgaggctcatggtc
atgcttagcagaattggagctgcgcagtttgaacggctccgaaaggacaaggtggagcag
ggactagcagcagagcatttgcagccgacgatggaggagctcaaaccctggcttgacatc
atccgtgtctcccttcttccttctctgtcctgttcttctgcctcagggacgttcgatgtc
gaactctggtcccttcttaaactcttcccctacacctcacgatacactctctatggcgaa
tggcgagatagcacttgcagtgcaaatggcaagaatccttgtctaatagcaactcacgcc
gcagcgatgactaccaaagaagttcaaaaggcccttcgacgagtcacttcaaccaacacc
tctgctacatccggtgcgactcctaccgaacgacatagtgctcgagcgctcgccaaacaa
agtcaccataatcctgtgtttgtctggacaactgcagtgacacaagtgaaagcgtaccca
aacatcggagaggctatcgtagatgcaggaaggtatatggctcaactgtcgtttgacgta
gccacgtttgtcatgttagatactttggcggacaacagggctttgaggctgaatgagatg
ggtaccggtgttgcgctctggttggaacgactgtccaaatttgttggagatttcaacaga
cgatacagcaacatggatctttatcccgttttgcaatacatcatcaatcgacttatgcgt
ggccactctggtgatctcatcatccttgaaaaactaatgtcttccatgtcaggcattgag
ccggtccctaacgatggtgtttctgaggcccagcttctagcatatgctggaggccgcgaa
atgatacgcgaggccttctcagccactcgaattatcgtaactgcccctccagaacctggt
gcatcggatcaacccgtgcgagcgcctatggagaaagtgaaaaatgtgaagaagagtttg
ccgaggttggtcaatgcattgagggaaaaggagttggcaatgcctatctggatagctttg
gcgcagacaagacaggcggtagtggacaagatggtaaatgcacctatcaaggccatgaac
cttgtccaggatacttgccacaacgcattcgtccagttcggcgatttcctcgttgactac
cttacttctgacgagcatatcgctcttactcccgatcttcagcaacttatagttgatttt
gggctcgagtatggcatggccttccagatcttgcgaccacgtctaaatgcggagattgaa
cgtgcacgtgtcgaggagaaagtcgccgtacaggcgcggcttgaagccgcgaagaaggca
atgtctgagaaagagaggaccgaatcacctcaaaaaattgagagccccgcgcttcccgga
tcgcccatgacgccgtctttgcagatcactccaggtgctactccgggaccaggagaaatt
gaggatgtcgtaatggaggagagtgaaaaggaggcacttagtgtacctgcaactaaaacg
ccgagcggtaaaggcaagatgtggtggccctctgctttgacgcctaccatgcaacaaaca
cgaaaacttctaccacgtgaagctaatgaggttatgagtgcgcctttctttgtcattttc
tggcatcttacgacccccgacatcgctttctcccctcaatcgtacgataacgcgataaag
tctatcaatcgacatatctccaccatctcctcttggagggtaaacccaagggataaaaca
aaggtggcagagcagcgggatgagttgactagactgaaagcgagggtgaaggttctgcaa
gaggaaaaagaaacacacggatcgctggtcaacggaccaatgaagagaaggatgaggctg
gagagtggcaagtggtttggcaaagccattgtggagaagaaccttcaaaggccgttagct
attcagcttcatcaatattgtttctaccctcgagctgttctttcgccctgcgacgccgtc
ttcgtcgccaagtttatccgtatggctcatgacttaggtacagccggcttctcgactttg
tttgtttacaacaatttcttcaatgataacctcgccgcctgtatcttctcctgtacagat
agtgaagctcgtaatcttggtcgatgcctggctttgattcttgccgatttggataagtgg
catcagagcgaaaacgtgtacctcaaggaagcgctcggcatctcacctaaacccaccgag
ggtggggaacaaaagaggctacctggtatgctctttaggtcaagggccggtgatgatatg
cgtgaaatgtcgtggcaagaattcagaaacttctacgccaagtgtcataacgtcctcacg
agggctctcatttcatgttggagcgaagcagaattcatgcataacaagaatgctatcatt
gtcgccttgcaagtaatcaaatatttcccactcatggagacaaatggcaaagcaatcgag
acagcggtgaagaagctgcaagccggtgaggttggcgagatccctaatgatttgaagatg
atgtgcacttccttcttatcgggtctgaagaaacgtcaagacgcaagaccattcgttgct
cctgcgacattccacggcgccgccgctcgtgctgctgttgcaagggcaccaagcgcccct
aaaggcgaatctccagctcccagcgccaccatatcaactccctctcggccccaaccagct
aacggtgcaaatgatacagcatcgccttctccagccggtactccgagagccatgactacc
gatcccagaactttgcgtcaaaaggtcgaagaaagtcgagccagggcggcggcttcggca
gccgctaaggaacaggaagctggcactgctccgcagtctcctcttgtgcaccccatcccc
actcgacccggtctgccctctcgtcttgctagttctgctaactcggtccctgtgactcca
actgggccctcggccgttactcgaacttctacgcctaatgcaacctctgtgaactctggt
gctcacacgcctgcctcttctatgggtccacctcccgatatgtctgtggatgaagcccga
gctgctgcacgtgcccgcagactcggcggtattcatcgcccccctccatctctaccgtct
gctgtagcacagactgtacagaatgcggcatctacttcccccacgaacttggatgttggg
aaacaggaggaaaaagtggaagagaaagagaaagagaaagagcccggtactccacctagt
cccgttgtggagtctactcgtggcaaatctccaccagcctccgttaaggtatcgcctaca
actactgtgaggactcacagggagggcagcgtcgaaagccgggcgagcgagaggtcgaag
aggcgcgagcaagacagagataggtaccgtcgtgacagagatcacagggatagggaaaaa
gagagggatcgacgggatcgatctactgcagaagatgacaagaagcgccaggaagatagc
gttccagcgtccactcaaagtgacgccgggcgcgaatccaggagatccaggcgtgatgga
gagcgagaaagagataaggaggagaagaagagtcgagagcgagacagggaagacagaaag
gaaagaggcagggataggtcttaccgaggcgaagacagtgatcgcaagcgcaagagggat
gaggagccttcgtcgaggaaactcgagccagaagcgtcaaatggcggtaggaaagagcgt
gaacgcgagcggagaagatacgatgaacgggatagggaaagggaacgcgattccagagat
cgggagagggaccgagaaagggatagaaacgagcgagacagggatggccatcgtgataga
cgcgaacgtgagcgggatggtcggcgacgagaccgagacagccgcgatgtccgagacacc
cgtgagcgacatcgtacacctcctgctgaagaccgtcccgatcttgcacccgctgccccc
aaagacagtactgatactacgcccaacgctttcggccccggggttgcgagaacacctcat
gcccttccggcaaggcctggcaattctgagcaggttcccaaaccacctccgaacgctgct
ccagtatcccaaaccccccaagaacctctcaatctggctgctagaatgggcatcatgaca
cggtcggcttctcctcatgtaagggctaatgagcccatccaaagatctacgagagatgac
cttcggagggataatgattggagtaatgcgccgaggagagaagaagccagaatggaggaa
gcgaggaaagagcctattgatcggaaacgagctttagaagctgaggctggctccgaggct
cgagaggagtcccctggagcatccaaacgtgtcaagattgatcgtgacaaggcccgtgga
cgaaggcaagagggcggcgcgaaaatgttccaacaagctatggggggtacaaaggacaaa
tag |
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