KEGG   Cryptococcus gattii: CGB_A4580W
Entry
CGB_A4580W        CDS       T02232                                 
Name
(RefSeq) U2 snRNA binding protein
  KO
K12830  splicing factor 3B subunit 3
Organism
cgi  Cryptococcus gattii
Pathway
cgi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CGB_A4580W
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cgi03021]
    CGB_A4580W
   03041 Spliceosome [BR:cgi03041]
    CGB_A4580W
   03036 Chromosome and associated proteins [BR:cgi03036]
    CGB_A4580W
Transcription machinery [BR:cgi03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     CGB_A4580W
Spliceosome [BR:cgi03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    CGB_A4580W
 Complex B
    CGB_A4580W
 Complex C
   U2 SnRNP specific factors
    CGB_A4580W
Chromosome and associated proteins [BR:cgi03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     CGB_A4580W
    TFTC complex
     CGB_A4580W
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_EML
Other DBs
NCBI-GeneID: 10188592
NCBI-ProteinID: XP_003191408
UniProt: E6QXR7
LinkDB
Position
A:join(931114..931264,931311..931333,931394..931448,931514..931628,931745..931807,931857..931865,931921..932035,932087..932179,932229..932322,932372..932574,932626..932804,932852..933210,933259..933749,933799..934175,934226..934514,934563..934769,934828..934953,935001..935359,935409..935538,935593..935808)
AA seq 1217 aa
MHLLNLTLSSPTNVSTAVVGSFSGSKSQEILCVRGGTKLEIFKLNATTGQLDTIVSTEAF
GTIRNIAGFRLAGMTKDYILATSDSGRLSILEFVISPTPHFESLYQEVFGKSGSRRIVPG
QFLAVDPKGRSCLVGSLEKTKLVYVLNRNTEGKLYPSSPLEAHKNHTLVTHVIGVDQGYD
NPLYAALEIDYSESDQDPTGEAYENAQKHLTFYELDLGLNHVVRKWSEPTDRRANLLVQV
PGGQNANSDRFEGPSGVLVCTEDHIIWKHMDVDAHRIPIPRRRNPLVQRGDKSRGLIIVS
AVMHKIKGAFFFLLQSEDGDLYKVWIEHNGEDVVALKIKYFDTVPVANSLCILKRGYIYV
ASEFSDQNLYQFQSLAEDDGEQEWSSTDYPENGNIDGPLPFAFFDPQPLRNLLLVDSVPS
LDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRTLKHGLDVTEMVSSPLPGVPTNVWT
LKLTEDDEYDSYIVLSFPNGTLVLSIGETIEEVNDTGFLSSGPTLAVQQLGNAGLLQVHP
YGLRHIRAADRVDEWPAPPGQTIVAATTNQRQVVIALSTAELVYFELDPEGSLSEYQEKK
ALPGNATCVTIAEVPEGRRRTPFLAVGCDNQTVSIISLEPDSTLDTLSLQALTAPPTSIC
LAEIFDTSIDKNRATMFLNIGLMNGVLLRTVVDPVDGSLSDTRLRFLGAKPPKLVRANVQ
GQPSVMAFSSRTWLLYTYQDMLQTQPLIYDTLEYAWSLSAAMCPDGLIGISGNTLRIFSI
PKLGEKLKQDSTPLTYTPRKFISHPFNPVFYMIEADHRTYSKGAIERIVKQKESEGRRVD
TLLLDLPANEFGRPRAPAGHWASCVRVLDPLANETIMTFDLDEDEAAFSIAIAYFERGGG
EPFLVVGTGVKTTLQPKGCKEGYLRVYAIKEQGRVLEFLHKTKTDDIPLCLAGFQGFLLA
GVGKSLRLYEMGKKALLRKCENNGFPTAVVTINVQGARIIVGDMQESTFYCVYRSIPTRQ
LLIFADDSQPRWITCVTSVDYETVACGDKFGNIFINRLDPSISEKVDDDPTGATILHEKS
FLMGAAHKTEMIAHYNIGSVVTSITKIPLVAGGRDVLVYTTISGAVGALVPFVSPDDIEF
MSTLEMHMRTQDISLVGRDHIAYRGYYVPIKGVVDGDLCESFSLLPYPKQQAIASDLDRS
VGDVLKKLEQMRTSSAF
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgcacctcctcaacctcaccctatcttccccgacaaatgtctccacagctgtcgtcggc
agtttttccgggtcaaaaagccaggagatcctgtgcgtcagaggaggcacaaaattggag
attttcaagttgaacgccacgaccggacagttggacactattgtctctacagaggcgttt
gggacgatcagaaatattgcaggattcagattagctggtatgacgaaagattacatcttg
gcgacgtcagactccggcagattatcaattctcgaatttgtcatctcgcccacgccgcat
tttgagagcctgtatcaggaggttttcgggaagagtggtagcagacgtatcgtccctggc
caattcttggccgttgaccccaaaggtagaagttgtcttgttggctccttggaaaagaca
aagctagtgtatgtcttgaacagaaataccgaaggaaagctttatccatcttctcctctt
gaggcccacaagaatcatactctcgtgactcacgtaatcggcgttgaccagggatatgac
aaccctttgtatgctgctttagaaattgactactccgaatccgatcaggaccctacagga
gaggcgtacgaaaatgctcagaagcacttaacgttctacgagttggatcttggattgaac
cacgttgtgcggaaatggagtgaacccacagacagacgggcaaatcttctggtgcaagtt
cccggtggccaaaacgccaactctgacagatttgaaggcccttcaggtgttcttgtctgc
acggaggaccacatcatctggaagcacatggatgttgatgcacacagaatacccatccct
agacggcgaaatcctcttgtgcaaagaggtgacaaaagtcgaggcttaatcatcgtttca
gcggtcatgcacaaaatcaagggtgcctttttcttcttactccagtctgaggatggtgac
ctgtacaaggtctggatcgagcacaacggtgaagatgttgttgcactcaaaatcaagtac
tttgacactgttcctgtggcaaacagtctttgtatcttgaagagaggttatatctatgtg
gccagcgagttcagtgaccaaaatttgtaccagttccagagtcttgcggaagatgacggc
gagcaagagtggtcatctaccgattaccctgagaatggtaatattgatggacctcttccc
tttgctttctttgacccgcaacctcttcgtaaccttctccttgttgacagtgttccttct
ttggaccccataactgatgcccacgtcgtcaaccttctcggtgccagttctgacactccc
caaatatatgcagcttgtggacgcggtgccagaagtacttttaggacgttgaaacacgga
ttggatgttacggagatggttagctcgccactacccggtgtgcctaccaacgtctggaca
ttgaaactgactgaagatgatgaatacgattcctacattgtcctgtctttccccaacggc
actttagtcctttcaatcggtgaaacgattgaagaagttaacgacactgggttcctttct
tcaggccctactcttgctgttcagcaacttggtaacgccggtcttttacaggttcaccct
tacggtcttcgacacattcgagccgccgatcgagtagatgaatggcctgctcctccagga
caaactattgttgctgctaccacgaaccagcggcaggtcgtgattgcgttgagtacggcc
gagttagtatactttgagcttgatcccgagggaagcttgagcgagtaccaagagaaaaag
gcgttgccaggtaatgccacttgtgtgactattgctgaggtgcctgaggggagaagaagg
acaccgttcttggctgttggttgcgacaatcaaacagtgtccatcatctctttggaacca
gatagcactctggatactttgagtcttcaggccctcactgctccccccacttcaatctgt
ctcgcggagatctttgacaccagtattgacaagaaccgtgctacgatgttcttgaacatc
ggtctcatgaacggcgttctgcttcgtaccgttgtcgaccctgttgacggatctctctct
gacactcgacttcgattcctcggtgccaagcctcccaaacttgttcgtgcgaacgttcag
ggtcagcccagtgttatggcattctccagcagaacctggttgctctacacgtaccaggat
atgttgcagacccaaccacttatttacgacactctggaatacgcctggtcactctcagcg
gctatgtgtcctgatggattgatcggtatctcgggtaatacactgagaattttcagtatt
cccaaattaggtgaaaaacttaagcaagactccaccccattgacttatacacctcgcaag
ttcatcagccatccctttaatcctgtcttttacatgatagaagcggatcaccgaacatac
tcaaagggtgccattgagaggattgtcaagcagaaggagtcggaaggtagaagggttgat
accttattgttggatctccctgccaatgagtttggccggcctagagcccccgccggccat
tgggcatcttgtgtgcgagtattggatcctcttgctaacgaaaccattatgacctttgac
ctcgatgaagatgaagctgccttttcgattgctattgcctactttgaacgtggcggcggc
gagccgttcctcgtggttggtactggtgtaaagacaactttgcagcccaaaggatgtaaa
gagggttacttgagagtatatgcgattaaggagcaagggagagtccttgagtttttgcac
aagactaagaccgatgacataccgctttgtttggctggcttccaaggctttctgttggcg
ggcgtcggcaagtctttgagattatacgagatgggtaaaaaggcattgctgagaaagtgt
gaaaacaatggattccccacggctgtcgttaccatcaacgtccaaggagcccgaataatc
gtcggtgacatgcaagaatcaactttctactgtgtctatcgctccattcccacccgacag
ctcctcatttttgccgacgattcccaacctcggtggatcacttgtgtcacaagcgtcgat
tatgagactgttgcatgtggggacaaattcggaaatatcttcatcaatcgactggaccct
agtatatcagagaaggtggatgacgaccctaccggtgctacaatcttgcacgagaagagt
ttcctgatgggtgcagcacacaagacagagatgatagcgcattataatattggaagtgtc
gtcacttctataactaaaatcccattggtagccggtggacgagatgtgttggtctacacc
actatctcaggcgctgttggtgcccttgttcccttcgtgtctccagacgatatcgaattc
atgtcaactctcgaaatgcacatgcgaacacaagacatttctctagttggccgagaccac
attgcttacaggggttactatgttcctatcaaaggcgttgttgatggggatctgtgtgag
agctttagtctcttgccttaccctaagcaacaagcgatcgcgtcagatttggataggagc
gtgggtgatgttctgaagaagcttgagcaaatgaggacgagcagtgcattttaa

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