KEGG   Cryptococcus gattii: CGB_A6220C
Entry
CGB_A6220C        CDS       T02232                                 
Name
(RefSeq) U6 snRNA-associated sm-like protein lsm8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
cgi  Cryptococcus gattii
Pathway
cgi03018  RNA degradation
cgi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CGB_A6220C
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CGB_A6220C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgi03019]
    CGB_A6220C
   03041 Spliceosome [BR:cgi03041]
    CGB_A6220C
Messenger RNA biogenesis [BR:cgi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CGB_A6220C
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CGB_A6220C
Spliceosome [BR:cgi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    CGB_A6220C
SSDB
Motif
Pfam: LSM RimP_C Gemin6
Other DBs
NCBI-GeneID: 10188727
NCBI-ProteinID: XP_003191600
UniProt: E6QY48
LinkDB
Position
A:complement(join(1246198..1246288,1246344..1246471,1246524..1246564,1246621..1246648))
AA seq 95 aa
MASIESYVDHTVQVILQDGRVIVGKLKGYDPRTNLILSDSVEREFSMEQGVEMVPLGLYV
IKGDNVAVVAELDEEKDSTINYNDIRAEPLPELRY
NT seq 288 nt   +upstreamnt  +downstreamnt
atggcctcgatcgagagctatgttgaccacactgtccaagtcattttgcaggatggccgc
gttatcgttggaaagctaaaaggatatgatccgcgtacgaatctcattctctccgactcg
gtggaacgtgaattttctatggagcaaggggttgagatggttccgttgggtctctacgtg
ataaagggagacaatgttgcggtagtggcagagttggatgaggagaaagatagcaccatc
aactataacgacatccgggcagaacctctacccgaattacggtattaa

DBGET integrated database retrieval system