Cryptococcus gattii: CGB_A6400C
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Entry
CGB_A6400C CDS
T02232
Name
(RefSeq) snoRNA binding protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
cgi
Cryptococcus gattii
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgi03009
]
CGB_A6400C
04121 Ubiquitin system [BR:
cgi04121
]
CGB_A6400C
Ribosome biogenesis [BR:
cgi03009
]
Eukaryotic type
90S particles
Other 90S particles
CGB_A6400C
Ubiquitin system [BR:
cgi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
CGB_A6400C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Sof1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_C
Gly_transf_sug
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
10188313
NCBI-ProteinID:
XP_003191591
UniProt:
E6QY66
LinkDB
All DBs
Position
A:complement(join(1292938..1293256,1293317..1293424,1293480..1294642,1294689..1294963,1295013..1295496,1295763..1296114,1296175..1296440,1296500..1297393,1297440..1297442))
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AA seq
1287 aa
AA seq
DB search
MKIKTISRSLDDHLPSSSSAPHPLSHNLAPHLHPFAKPREYTRAVTAVKMERMFAKPFVD
ALGGHQDGVYCLGKDSRRAGVVAGGGGDGEVIVHSLGLRRPLLKIPGAHRGMVGGICWTS
EAQDRRRGLITCGKLDGTIKLWRSEAFAPGLRDKDAFEGNEFGLGQAEGSGFLDQAGAIG
ESGYDEEEGGGLSLDSAKRDALGQNLEPTMTFTSKNGLNGIDHHRTDAVFATASNTVQIW
DEQRTAPLSTLQFGNSMETVSGVKFNQSETSVLASVGNDRTMCLYDIRTGKAERRIVTQF
TSNCLSWCPTLPTLLLLGSEDHNLYTFDIRNLETPNQIYKGHVGGVMGCDWSPTGEGFVS
GSYDRTVRLWNREEGKSRDVYHTKRMQRVFDVSYTPTADFVLSASDDGNVRIWKSDASKK
LGPVSTKERQAIEYRQKLVERYGREKGVRQVKERRHVPQSIHNATKLKREMIEARNIKED
RRRKHSRAGREKPKAERKSKLAVMMIKRHNPTKPRRSPLPTSAWDDDRRFGLSGPSAYSR
WFTTLYIPLPFGHPSDSHSLSSGSSLGSPRSYHAKPRARHLKIYLPIPPRLYARIPRLNS
PIRVLFLLVICAVVGFFLLGFRKTRQGERTWSPPFVDPDTMVITPEEAAMVWEWEILSGH
YPSTEYPPDHLPLSPSLKNPVVPGTLLPSPSTPTPLVAYQNRADKFPSAHLAGNGPERHY
LSVWDMRESQPGFPARPMPGSIMDLDLVLGKCDFGTNKYVRDCLEFLRIGGGLDNGKRVR
RGNYLTQYKQLYYEESTPSQSYSMTPRNLKQSTGRSKTPLMLSDPYDIPASFDSRDACDP
LHPRIFHIFWAGPFTDKPYMAVMSFLFTQNLGLDKPVDAVSDTANVVRGTCRPQLWLWIN
PGPAASVPNPSAKREMYEQLATNPWSAPFLHERFRDVVKFKMWNTTEQLDGVHELKDHWR
KMPIFNSGGNTYGDPLLAKTEDEATEEVEDGSSKTVSIKKKGSLFEKVGSSSESDYDRLS
VILSDMARFIVTYRFGGIYLDADTIFLRDWEELWNYRGQFAYRWSWHEKYNTAVLKLHKG
SALSSFLFKTALHNGLDFHPMTVSKYLKDAGLEKLLFRVPDALFDPAWLNMERYQRDRPP
FPYFPEFSVFFSNDKFDTAGPQPLGFDGFFRGAFSYHFHNFWWLPFDPSRNFPDLGHRFI
KGERALRDAARSSSSDQAAHTVGNDVEPRNVPGTSQEGVEGDSDVTNREDMDDEPDLSWS
TVLKRSFEGFLRGERPNAYGEWLEWGD
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaaaccatctctcgctccctagacgatcatctgccctcctcctcctctgct
ccccatcctctctcgcacaacctcgcaccccacctccaccccttcgcaaagccaagagaa
tacacacgtgcagtcaccgccgttaagatggagcgcatgtttgctaaaccttttgttgac
gctcttggtggtcatcaggatggtgtctactgtctcggtaaagactcgagacgggccggt
gtcgttgccggtggaggcggcgatggcgaagtcattgtacattcgttgggcttgcggagg
ccgttgctcaaaatcccaggggcccatagaggcatggttggtggcatatgctggacatct
gaggcccaagatcgtcggagaggactgatcacctgcggcaaacttgatggcaccatcaaa
ctttggcgaagcgaggcgtttgcccctggtttaagagataaggatgctttcgagggtaac
gagtttggtcttggacaagctgaagggagtgggtttttggatcaggctggagcgatcgga
gaaagcgggtatgatgaagaggaaggcggaggcttgtcacttgattcggcaaagagggat
gctttggggcaaaatcttgaacctaccatgacttttacatccaagaacggtttaaatggt
atcgatcatcaccgtacagatgcggtattcgctactgcttcaaatactgtgcagatctgg
gacgagcagaggacggcgccattgagcacacttcagtttggaaattcgatggagacagtg
tctggcgtcaaattcaaccagagcgagactagtgtgctggcgagtgtgggtaatgacaga
acaatgtgtttgtacgatatccgaacgggcaaagccgagagacgtattgttacacagttc
acctccaactgcctctcatggtgtcccaccctccccacccttcttcttctcggctcagag
gatcacaacctctacacatttgacattcgcaaccttgaaacccctaatcaaatttacaag
ggccacgtcggtggtgtcatgggatgcgactggagcccgacgggcgaaggatttgtctct
gggtcctatgacagaactgtgcgattgtggaacagagaggaaggcaagtcaagggatgtc
taccacaccaagcgtatgcagagagtattcgacgtcagctacacccccactgccgacttt
gtcctttctgcatcggatgatggtaacgtgcgcatatggaaatcggatgcgtccaagaaa
ctcggcccagtttcgaccaaggagcgtcaagctattgagtaccgacaaaaacttgtggag
agatacggccgagagaagggcgtcaggcaagtcaaggagaggagacatgtgccgcagagc
atccacaatgccacgaagttaaagagggaaatgatagaggcgcggaatatcaaggaggac
aggagacggaagcattcgcgtgctgggcgggaaaagccaaaggcggaaaggaagagtaag
ttggctgttatgatgatcaagcgacacaatcccacaaagccgcgccgctcacctctcccc
acctcagcatgggacgacgaccggcgcttcggcctctctgggccctcagcgtactctaga
tggttcaccactctatacatccccctcccctttggccatccatctgactcccactcgctc
tcctcaggatcatccttaggatcgccaaggtcctaccacgcaaagcctagagctcgccat
ctcaaaatctacctccccattccgccccgtctctacgcccgtatcccgcgcctcaattct
cccatccgagtcctttttcttctcgtcatatgtgcagtcgtgggcttcttccttcttgga
ttcagaaaaacaaggcagggtgaaagaacgtggtcgcctccgttcgtagacccagataca
atggtgattacgccggaagaggcggcaatggtatgggagtgggaaatcttgagtgggcat
tatccgagtactgaatatcctcccgaccatctccctctttctccctccctcaaaaatcct
gtcgtacctggtaccctcctcccctccccatccactcccactcctctagtcgcataccaa
aaccgtgcggacaagttcccttccgcccatttggctggaaatggccccgagcgacactat
ctctctgtatgggatatgcgagaaagtcagcctgggttcccggcaagacctatgccggga
tccattatggatctggatctagtgctgggaaaatgcgattttggcaccaataagtatgtg
cgagactgtttggaattcctgaggattggaggaggccttgacaacggcaaaagggtgcga
agaggtaactatttaactcaatataaacaactctattatgaggaatctactccttcccaa
tcatactccatgactcctcgcaatcttaagcaatcaaccggccgatccaagacccctctt
atgctttccgatccctacgatatcccggctagttttgactcgcgtgacgcctgtgatccc
ttgcaccccaggatattccacatattctgggcaggaccgttcacggataagccatacatg
gctgtcatgtccttcctctttactcagaaccttgggcttgacaagccagtggacgcagtg
tctgacactgcaaacgtcgttcgcgggacatgtcgacctcaactctggttgtggatcaac
cccggtcctgctgcttccgtacccaatccttcagctaaaagagaaatgtacgaacaactg
gctaccaacccatggtctgcgcctttcttgcacgagagatttagggatgttgtcaaattc
aagatgtggaacaccactgaacaactcgatggtgtgcatgagcttaaggatcactggcga
aaaatgcccatcttcaactcgggcggaaatacgtatggtgatccattacttgcgaaaacc
gaggacgaggccaccgaagaagtcgaagatgggtcaagcaagactgtctctatcaagaag
aagggcagtcttttcgaaaaggttggctcctcctctgaatcagactatgaccgtttgtcc
gtcattctctctgatatggcacgattcatcgtcacttatcgatttggcggtatctatctc
gacgctgataccatcttccttcgtgattgggaagaactgtggaactaccgcggccagttt
gcttaccgctggtcatggcatgaaaaatacaacacggcagtactcaagctccacaagggc
tccgctctcagttcattcttgttcaaaacggctttgcacaacggattagacttccacccc
atgacggtgtcgaagtatctgaaagacgctggactggaaaaacttttattcagggtgcct
gatgcattgtttgacccggcttggttgaacatggaaaggtatcaaagagataggccccca
ttcccgtacttcccagaattttccgtcttcttttccaatgataaatttgacactgctggt
cctcaaccattagggttcgatgggttcttcaggggcgcattctcttatcacttccataat
ttctggtggctgccctttgacccttcacgcaattttccagatctcggtcatcgattcata
aagggcgaaagagctttgcgcgatgctgctcgttcttcatcctccgatcaagctgcccac
actgttggtaacgatgtagagccccgcaatgtccccggtactagtcaagagggcgttgag
ggcgacagtgatgtcacgaatagggaggacatggatgatgagcctgatttgagctggtca
actgtgctcaagaggagctttgaaggattcttgagaggagagaggccaaatgcttatgga
gaatggctcgagtggggtgactag
DBGET
integrated database retrieval system
