Cryptococcus gattii: CGB_A7230W
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Entry
CGB_A7230W CDS
T02232
Name
(RefSeq) cytosolic small ribosomal subunit protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
cgi
Cryptococcus gattii
Pathway
cgi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGB_A7230W
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgi03019
]
CGB_A7230W
Messenger RNA biogenesis [BR:
cgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CGB_A7230W
mRNA degradation factors
5'-3' decay
Decapping complex
CGB_A7230W
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
10187845
NCBI-ProteinID:
XP_003191619
UniProt:
E6QYB7
LinkDB
All DBs
Position
A:join(1449797..1450043,1450098..1450277,1450333..1450428,1450480..1451292,1451345..1452033,1452082..1452546,1452600..1452626)
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AA seq
838 aa
AA seq
DB search
MSAGFFGFDTALPEHRQSQHRPNDGAVTSKFQSASSVPNPFNLEAPEDEEMEVYTWGQGM
DKDTEEADELNDATFGVDINAIRGGQFSFGNEESVALPAKPSKQPQSQRGPIASTASRYR
PKAVADPFAFSEDDFYASRPVKKTQSKSKTKASVEPAWTKPAGQVTSWGTAPSSTVKPSL
ASKPTQGEAPGHIKSLEEIEAEFASMPAPSAAQVAFQAPTQLSGPPPANAVVTLEELERQ
MMEDVPPSLAQHQAQQQAPSREVTPTQMSGLAQSGYASQKAVLDSMFPDLGKGPGPVPPG
QQQGQTGQSPVPIGPSPEEFARQEHFKEVFEAKVQAMSKYNNLMGSSDKDFITRIQLSQL
ATSDPYISDFYAQVFSAMERSRRAHESGQMDRPTVVQIAAGFGFGVGGPAGNRFGKMGQN
TMQKLSTQVKKLVESRTAHQKSANTAALQGALGRVTRGGAAAPRPVLAIPTNTKLENRPA
SHLNQSTGIQRPPLTRKQIMYALEGLYTDVLELEQFRREAPPSASVDEIEIWNAKCHVKV
DQIWAKLMVQEPIEVSNPHPFISLLNPPKGQRILGRIILQLPDQKIYTLLSLLVVKFHQL
DVVARAPPPPVTDASLLTKADRLDRGKREADTDGFLYNLVPAMDMAINKCKLGLLGGLLV
AAVQRLDVVKVASTRPGVVLFTALLSKAQSLIRAPSPDPLNPHSGAHPDQIELEHFPRQF
SVFLDALLPSLPDLFPSSIAAKHAFGPSAYLMSGENLPEKEGIEMERREAEVWALAAALA
VNSAEEEQTALVAALREKILHTVQGARNPMVSPVRAEMKLRNVNMFLNGLGLDAAMIE
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccggattcttcggttttgataccgcactccccgaacaccgtcaatcccagcat
cgtcccaatgacggagccgtcacttccaaattccaaagtgccagttctgtgcctaatccc
ttcaacctcgaggccccagaggatgaggaaatggaagtatacacttggggtcaagggatg
gacaaggataccgaggaagccgatgagctgaatgatgcaacgtttggcgtggacatcaat
gccatcaggggtgggcaattctcgttcgggaacgaagagtcagttgctttaccggctaag
ccatcaaaacagccccagtcgcaaagaggacccatcgcttcgactgcctcccggtaccga
cctaaggcagtggccgatccatttgccttttctgaagatgacttttatgcttctcgccct
gtcaaaaaaacccaatcgaagtccaagacaaaggcctcggttgaacctgcttggacaaaa
ccagctggccaggtcaccagctggggaacggctccttcttctacagtgaagccatctctt
gcgtccaaacctactcaaggggaagctcccggtcacatcaagagtctcgaggagattgaa
gcagagtttgcttcaatgcctgcgcccagcgctgcgcaggttgccttccaggctcctacg
caattatcaggaccgcctcctgcaaatgctgttgtaacccttgaagaacttgagaggcaa
atgatggaagacgtccctccatctcttgcccaacatcaggcccaacagcaggcgccttct
cgagaggttactcccactcagatgtcaggcctcgcccagtcaggatatgcttcgcagaaa
gctgtcctcgacagtatgtttcctgatcttggaaaaggtcctggtcccgtacctccaggt
cagcagcaaggccaaacagggcaaagcccagtccctataggccctagtcccgaagagttc
gctcggcaggagcatttcaaggaggtttttgaagctaaagtccaggcaatgtccaagtac
aataatcttatgggatcgtcggacaaggactttattacccgcattcaattgtctcaactc
gctacttccgacccttatatttccgacttctatgcccaagttttttctgcgatggagaga
agccgccgggcgcatgagagtggtcagatggataggccgactgtggtacaaattgcggct
ggttttggctttggcgtcggcggtcctgctggcaacagatttggaaaaatgggacaaaac
actatgcagaaattgtcgacacaggtcaagaaattggttgagagtaggacagcgcaccag
aaatctgccaatactgctgctcttcagggcgctctcggccgagtcacacgaggtggtgct
gctgctcctcgtcccgttcttgccatccctacaaacaccaagctcgaaaaccgtcctgcg
tcccaccttaatcaatctacgggcatacagcgcccccctctcactcgcaaacaaatcatg
tatgccctagaaggcctctacaccgacgtccttgagctcgagcagttccgtagagaagca
ccgccttcagcctctgtcgatgaaatcgaaatctggaacgctaaatgtcatgtaaaggtg
gatcagatctgggccaagcttatggttcaagagcctatcgaagtatcaaatccccatcca
tttatatcccttctcaaccccccaaaaggtcaacgtatcctcggccggatcatccttcaa
cttcctgatcagaagatttacaccttgctgtctctccttgttgtcaaattccatcaacta
gacgttgtggctcgtgctcctcctcctccagttacagacgccagcctcttaaccaaggct
gacagattagaccgcggtaagcgcgaggcggatacggacggcttcctgtacaacttggtg
cctgctatggacatggcgattaacaagtgtaagctgggccttttaggtggtctgttggtc
gctgctgtgcagagattggatgttgtgaaggttgcctctaccagacctggcgttgtcctg
ttcacagcacttttatcaaaagctcagtctcttatccgcgctccctctcccgatcctctc
aaccctcattccggcgcccatcctgaccagatagagcttgaacacttccctcgtcagttc
tcggtattccttgatgctcttttaccttctttgccagatcttttcccgtcatctatcgct
gccaagcatgcctttggcccctcggcgtacttgatgtccggagagaatcttcccgaaaag
gaaggcatagagatggagaggcgagaagctgaagtctgggcactggctgctgctttggcc
gttaactcggcagaagaggagcagacagcattggtcgctgctttgagggaaaagattctt
catactgtccagggtgccagaaaccctatggttagccccgttagagcggaaatgaagctg
agaaatgtgaacatgttcttgaacggtctcggtttggatgcggcgatgattgaataa
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